Gene annotation
Transcriptome id Sobic.006G034800.1
Synonym emb2731, Sb06g004500
Functional annotation neighbor of COX4, putative, expressed
UniProt C5YDD7
Pfam PF03665
Panther DB PTHR12941
NCBI CDD KOG3289; Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55940 : Uncharacterised protein family (UPF0172)
RAP-DB (Rice) LOC_Os04g20230.1 : neighbor of COX4, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ82064
Barley -
Wheat TraesCS2B02G091800 , TraesCS2A02G076900 , TraesCS2D02G075500
Populus -


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cDNA sequences
Sobic.006G034800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257001 - -
2 Sobic.001G105100 neighbor of COX4, putative, expressed -
3 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
4 Sobic.003G400100 leaf senescence related protein, putative, expressed -
5 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
6 Sobic.010G205300 secreted salivary protein, putative, expressed -
7 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
8 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
9 Sobic.002G131900 expressed protein -
10 Sobic.004G232800 expressed protein -
11 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.002G055100 expressed protein -
13 Sobic.001G237500 transporter family protein, putative, expressed -
14 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.003G217100 Yip1 domain containing protein, expressed -
16 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
17 Sobic.004G072800 expressed protein -
18 Sobic.010G269100 zinc finger family protein, putative, expressed -
19 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
20 Sobic.002G268400 expressed protein -


Gene co-expression network
sample Sobic006G034800 Sobic006G034800 Sobic006G257001 Sobic006G257001 Sobic006G034800--Sobic006G257001 Sobic001G105100 Sobic001G105100 Sobic006G034800--Sobic001G105100 Sobic001G067900 Sobic001G067900 Sobic006G034800--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic006G034800--Sobic003G400100 Sobic001G041200 Sobic001G041200 Sobic006G034800--Sobic001G041200 Sobic010G205300 Sobic010G205300 Sobic006G034800--Sobic010G205300 Sobic010G105600 Sobic010G105600 Sobic006G034800--Sobic010G105600 Sobic001G206900 Sobic001G206900 Sobic006G034800--Sobic001G206900 Sobic002G131900 Sobic002G131900 Sobic006G034800--Sobic002G131900 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic006G257001--Sobic001G105100 Sobic001G237500 Sobic001G237500 Sobic006G257001--Sobic001G237500 Sobic006G257001--Sobic001G041200 Sobic006G257001--Sobic002G131900 Sobic006G257001--Sobic010G105600 Sobic003G217100 Sobic003G217100 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic001G105100--Sobic001G067900 Sobic001G105100--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic001G105100--Sobic008G132800 Sobic001G105100--Sobic006G257001 Sobic001G105100--Sobic006G034800 Sobic001G105100--Sobic010G105600 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic001G067900--Sobic001G105100 Sobic004G072800 Sobic004G072800 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic003G400100--Sobic006G034800 Sobic001G261456 Sobic001G261456 Sobic003G400100--Sobic001G261456 Sobic003G400100--Sobic002G131900 Sobic002G313500 Sobic002G313500 Sobic003G400100--Sobic002G313500 Sobic003G400100--Sobic010G105600 Sobic003G400100--Sobic001G067900 Sobic009G226400 Sobic009G226400 Sobic003G400100--Sobic009G226400 Sobic001G371200 Sobic001G371200 Sobic003G400100--Sobic001G371200 Sobic010G017800 Sobic010G017800 Sobic003G400100--Sobic010G017800 Sobic006G242300 Sobic006G242300 Sobic001G041200--Sobic006G242300 Sobic003G119400 Sobic003G119400 Sobic001G041200--Sobic003G119400 Sobic001G041200--Sobic006G257001 Sobic001G041200--Sobic006G034800 Sobic001G041200--Sobic001G067900 Sobic002G259400 Sobic002G259400 Sobic001G041200--Sobic002G259400 Sobic001G041200--Sobic001G105100 Sobic006G056600 Sobic006G056600 Sobic001G041200--Sobic006G056600 Sobic009G033900 Sobic009G033900 Sobic001G041200--Sobic009G033900 Sobic004G232800 Sobic004G232800 Sobic010G205300--Sobic004G232800 Sobic003G349300 Sobic003G349300 Sobic010G205300--Sobic003G349300 Sobic007G168600 Sobic007G168600 Sobic010G205300--Sobic007G168600 Sobic001G502200 Sobic001G502200 Sobic010G205300--Sobic001G502200 Sobic010G205300--Sobic002G281300 Sobic004G356900 Sobic004G356900 Sobic010G205300--Sobic004G356900 Sobic003G261400 Sobic003G261400 Sobic010G205300--Sobic003G261400 Sobic004G194900 Sobic004G194900 Sobic010G205300--Sobic004G194900 Sobic010G205300--Sobic001G067900 Sobic010G105600--Sobic001G237500 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic010G105600--Sobic003G400100 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic010G105600--Sobic006G034800 Sobic001G323000 Sobic001G323000 Sobic001G206900--Sobic001G323000 Sobic003G312200 Sobic003G312200 Sobic001G206900--Sobic003G312200 Sobic004G010900 Sobic004G010900 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G085100 Sobic001G085100 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic006G148200 Sobic006G148200 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic001G206900--Sobic003G349300 Sobic002G131900--Sobic006G257001 Sobic002G131900--Sobic003G400100 Sobic004G274400 Sobic004G274400 Sobic002G131900--Sobic004G274400 Sobic002G131900--Sobic001G237500 Sobic002G131900--Sobic010G105600 Sobic002G131900--Sobic001G067900 Sobic002G131900--Sobic006G034800 Sobic003G052400 Sobic003G052400 Sobic002G131900--Sobic003G052400 Sobic002G131900--Sobic004G072800
Octagon: transcription factors


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