Gene annotation
Transcriptome id Sobic.002G055100.1
Synonym Sb02g004620
Functional annotation expressed protein
UniProt C5XB33
Pfam PF09803
Panther DB PTHR35700
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005739; mitochondrion


Orthologs (automatic annotation)
TAIR AT4G14615 : -
RAP-DB (Rice) LOC_Os07g08410.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK20581
Barley -
Wheat TraesCS2D02G339300 , TraesCS2B02G257700 , TraesCS2A02G323700
Populus -


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cDNA sequences
Sobic.002G055100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G067600 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.006G034800 neighbor of COX4, putative, expressed -
3 Sobic.003G400100 leaf senescence related protein, putative, expressed -
4 Sobic.001G105100 neighbor of COX4, putative, expressed -
5 Sobic.006G257001 - -
6 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
7 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
8 Sobic.003G219500 adaptin ear-binding coat-associated protein 2, putative, expressed -
9 Sobic.006G183000 RING zinc finger protein, putative, expressed -
10 Sobic.001G127000 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
11 Sobic.001G332300 expressed protein -
12 Sobic.006G280600 tubulin folding cofactor B, putative, expressed K17262: TBCB, CKAP1, tubulin-specific chaperone B
13 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
15 Sobic.001G451901 - -
16 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
17 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
18 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
19 Sobic.004G232800 expressed protein -
20 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic002G055100 Sobic002G055100 Sobic002G067600 Sobic002G067600 Sobic002G055100--Sobic002G067600 Sobic006G034800 Sobic006G034800 Sobic002G055100--Sobic006G034800 Sobic003G400100 Sobic003G400100 Sobic002G055100--Sobic003G400100 Sobic001G105100 Sobic001G105100 Sobic002G055100--Sobic001G105100 Sobic006G257001 Sobic006G257001 Sobic002G055100--Sobic006G257001 Sobic001G067900 Sobic001G067900 Sobic002G055100--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic002G055100--Sobic009G033900 Sobic003G219500 Sobic003G219500 Sobic002G055100--Sobic003G219500 Sobic006G183000 Sobic006G183000 Sobic002G055100--Sobic006G183000 Sobic002G067100 Sobic002G067100 Sobic002G067600--Sobic002G067100 Sobic001G127000 Sobic001G127000 Sobic002G067600--Sobic001G127000 Sobic002G067600--Sobic002G055100 Sobic006G052500 Sobic006G052500 Sobic002G067600--Sobic006G052500 Sobic009G219000 Sobic009G219000 Sobic002G067600--Sobic009G219000 Sobic007G006900 Sobic007G006900 Sobic002G067600--Sobic007G006900 Sobic006G126100 Sobic006G126100 Sobic002G067600--Sobic006G126100 Sobic003G126600 Sobic003G126600 Sobic002G067600--Sobic003G126600 Sobic003G051200 Sobic003G051200 Sobic002G067600--Sobic003G051200 Sobic006G034800--Sobic006G257001 Sobic006G034800--Sobic001G105100 Sobic006G034800--Sobic001G067900 Sobic006G034800--Sobic003G400100 Sobic001G041200 Sobic001G041200 Sobic006G034800--Sobic001G041200 Sobic010G205300 Sobic010G205300 Sobic006G034800--Sobic010G205300 Sobic010G105600 Sobic010G105600 Sobic006G034800--Sobic010G105600 Sobic001G206900 Sobic001G206900 Sobic006G034800--Sobic001G206900 Sobic002G131900 Sobic002G131900 Sobic006G034800--Sobic002G131900 Sobic003G400100--Sobic006G034800 Sobic001G261456 Sobic001G261456 Sobic003G400100--Sobic001G261456 Sobic003G400100--Sobic002G131900 Sobic002G313500 Sobic002G313500 Sobic003G400100--Sobic002G313500 Sobic003G400100--Sobic010G105600 Sobic003G400100--Sobic001G067900 Sobic009G226400 Sobic009G226400 Sobic003G400100--Sobic009G226400 Sobic001G371200 Sobic001G371200 Sobic003G400100--Sobic001G371200 Sobic010G017800 Sobic010G017800 Sobic003G400100--Sobic010G017800 Sobic001G105100--Sobic001G067900 Sobic003G217100 Sobic003G217100 Sobic001G105100--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic001G105100--Sobic008G132800 Sobic001G105100--Sobic006G257001 Sobic001G105100--Sobic006G034800 Sobic001G105100--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic006G257001--Sobic001G105100 Sobic006G257001--Sobic001G237500 Sobic006G257001--Sobic001G041200 Sobic006G257001--Sobic002G131900 Sobic006G257001--Sobic010G105600 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic001G067900--Sobic001G105100 Sobic004G072800 Sobic004G072800 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic009G033900--Sobic006G183000 Sobic002G268400 Sobic002G268400 Sobic009G033900--Sobic002G268400 Sobic001G249700 Sobic001G249700 Sobic009G033900--Sobic001G249700 Sobic004G074300 Sobic004G074300 Sobic009G033900--Sobic004G074300 Sobic001G263000 Sobic001G263000 Sobic009G033900--Sobic001G263000 Sobic001G152000 Sobic001G152000 Sobic009G033900--Sobic001G152000 Sobic004G057800 Sobic004G057800 Sobic009G033900--Sobic004G057800 Sobic010G269100 Sobic010G269100 Sobic009G033900--Sobic010G269100 Sobic006G252100 Sobic006G252100 Sobic009G033900--Sobic006G252100 Sobic002G376300 Sobic002G376300 Sobic003G219500--Sobic002G376300 Sobic003G219500--Sobic003G400100 Sobic003G219500--Sobic001G127000 Sobic009G238800 Sobic009G238800 Sobic003G219500--Sobic009G238800 Sobic002G378200 Sobic002G378200 Sobic003G219500--Sobic002G378200 Sobic003G219500--Sobic001G067900 Sobic003G187200 Sobic003G187200 Sobic003G219500--Sobic003G187200 Sobic003G219500--Sobic003G051200 Sobic003G219500--Sobic006G034800 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600
Octagon: transcription factors


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