Gene annotation
Transcriptome id Sobic.001G127000.1,Sobic.001G127000.4,Sobic.001G127000.3,Sobic.001G127000.2
Synonym Sb01g011140, ATCES1
Functional annotation alkaline phytoceramidase, putative, expressed
UniProt A0A1Z5S5Y4 , A0A1Z5S5E4 , A0A1Z5S5G8 , A0A1Z5S5S9
Pfam PF05875
Panther DB PTHR12956 PTHR12956:SF28
NCBI CDD KOG2329; Alkaline ceramidase
KEGG Orthology K04711; ACER3, dihydroceramidase
Gene Ontology GO:0016811; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides GO:0016021integral component of membrane GO:0006672ceramide metabolic process


Orthologs (automatic annotation)
TAIR AT4G22330 : Alkaline phytoceramidase (aPHC)
RAP-DB (Rice) LOC_Os03g49180.1 : alkaline phytoceramidase, putative, expressed
MaizeGDB (Corn) Zm00025a017062 , Zm00025a007707
Brachypodium PNT65892 , KQJ93365 , KQJ93364 , KQJ93363
Barley HORVU4Hr1G005780.4 , HORVU4Hr1G005780.5 , HORVU4Hr1G005780.2 , HORVU4Hr1G005780.3 , HORVU4Hr1G005780.1
Wheat TraesCS4B02G037100 , TraesCS4A02G276600 , TraesCS4D02G034400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G257200 CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
2 Sobic.002G361300 eukaryotic aspartyl protease domain containing protein, expressed -
3 Sobic.002G067600 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
5 Sobic.003G187200 phox domain-containing protein, putative, expressed -
6 Sobic.004G003501 - -
7 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
9 Sobic.006G194500 expressed protein -
10 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
11 Sobic.005G074500 VHS and GAT domain containing protein, expressed -
12 Sobic.003G219500 adaptin ear-binding coat-associated protein 2, putative, expressed -
13 Sobic.001G261456 - -
14 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
15 Sobic.004G003401 - -
16 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
17 Sobic.003G400100 leaf senescence related protein, putative, expressed -
18 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
19 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
20 Sobic.007G213000 beta 1,2-xylosyltransferase, putative, expressed K03714: glycoprotein 2-beta-D-xylosyltransferase


Gene co-expression network
sample Sobic001G127000 Sobic001G127000 Sobic009G257200 Sobic009G257200 Sobic001G127000--Sobic009G257200 Sobic002G361300 Sobic002G361300 Sobic001G127000--Sobic002G361300 Sobic002G067600 Sobic002G067600 Sobic001G127000--Sobic002G067600 Sobic003G270600 Sobic003G270600 Sobic001G127000--Sobic003G270600 Sobic003G187200 Sobic003G187200 Sobic001G127000--Sobic003G187200 Sobic004G003501 Sobic004G003501 Sobic001G127000--Sobic004G003501 Sobic006G126100 Sobic006G126100 Sobic001G127000--Sobic006G126100 Sobic007G120500 Sobic007G120500 Sobic001G127000--Sobic007G120500 Sobic006G194500 Sobic006G194500 Sobic001G127000--Sobic006G194500 Sobic009G257200--Sobic003G187200 Sobic009G228700 Sobic009G228700 Sobic009G257200--Sobic009G228700 Sobic004G039600 Sobic004G039600 Sobic009G257200--Sobic004G039600 Sobic009G257200--Sobic002G361300 Sobic007G132100 Sobic007G132100 Sobic009G257200--Sobic007G132100 Sobic010G261600 Sobic010G261600 Sobic009G257200--Sobic010G261600 Sobic002G378200 Sobic002G378200 Sobic009G257200--Sobic002G378200 Sobic002G303600 Sobic002G303600 Sobic009G257200--Sobic002G303600 Sobic009G257200--Sobic001G127000 Sobic001G394600 Sobic001G394600 Sobic002G361300--Sobic001G394600 Sobic002G361300--Sobic009G257200 Sobic010G205800 Sobic010G205800 Sobic002G361300--Sobic010G205800 Sobic002G361300--Sobic001G127000 Sobic002G361300--Sobic007G120500 Sobic009G224000 Sobic009G224000 Sobic002G361300--Sobic009G224000 Sobic001G114000 Sobic001G114000 Sobic002G361300--Sobic001G114000 Sobic002G361300--Sobic004G039600 Sobic004G358600 Sobic004G358600 Sobic002G361300--Sobic004G358600 Sobic002G067100 Sobic002G067100 Sobic002G067600--Sobic002G067100 Sobic002G067600--Sobic001G127000 Sobic002G055100 Sobic002G055100 Sobic002G067600--Sobic002G055100 Sobic006G052500 Sobic006G052500 Sobic002G067600--Sobic006G052500 Sobic009G219000 Sobic009G219000 Sobic002G067600--Sobic009G219000 Sobic007G006900 Sobic007G006900 Sobic002G067600--Sobic007G006900 Sobic002G067600--Sobic006G126100 Sobic003G126600 Sobic003G126600 Sobic002G067600--Sobic003G126600 Sobic003G051200 Sobic003G051200 Sobic002G067600--Sobic003G051200 Sobic004G236200 Sobic004G236200 Sobic003G270600--Sobic004G236200 Sobic003G394200 Sobic003G394200 Sobic003G270600--Sobic003G394200 Sobic009G229600 Sobic009G229600 Sobic003G270600--Sobic009G229600 Sobic003G427600 Sobic003G427600 Sobic003G270600--Sobic003G427600 Sobic009G226400 Sobic009G226400 Sobic003G270600--Sobic009G226400 Sobic003G270600--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic003G270600--Sobic001G369000 Sobic009G049400 Sobic009G049400 Sobic003G270600--Sobic009G049400 Sobic004G228800 Sobic004G228800 Sobic003G270600--Sobic004G228800 Sobic010G204400 Sobic010G204400 Sobic003G187200--Sobic010G204400 Sobic004G345700 Sobic004G345700 Sobic003G187200--Sobic004G345700 Sobic003G187200--Sobic004G039600 Sobic003G187200--Sobic007G132100 Sobic006G195700 Sobic006G195700 Sobic003G187200--Sobic006G195700 Sobic006G163800 Sobic006G163800 Sobic003G187200--Sobic006G163800 Sobic003G187200--Sobic002G378200 Sobic003G187500 Sobic003G187500 Sobic003G187200--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G187200--Sobic010G053800 Sobic004G003401 Sobic004G003401 Sobic004G003501--Sobic004G003401 Sobic004G003501--Sobic001G127000 Sobic004G067700 Sobic004G067700 Sobic004G003501--Sobic004G067700 Sobic002G187801 Sobic002G187801 Sobic004G003501--Sobic002G187801 Sobic010G005700 Sobic010G005700 Sobic004G003501--Sobic010G005700 Sobic004G003501--Sobic001G114000 Sobic004G003501--Sobic006G194500 Sobic009G041700 Sobic009G041700 Sobic004G003501--Sobic009G041700 Sobic001G284800 Sobic001G284800 Sobic004G003501--Sobic001G284800 Sobic004G004300 Sobic004G004300 Sobic006G126100--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic006G126100--Sobic008G004600 Sobic006G126100--Sobic004G039600 Sobic001G534800 Sobic001G534800 Sobic006G126100--Sobic001G534800 Sobic003G104000 Sobic003G104000 Sobic006G126100--Sobic003G104000 Sobic006G012500 Sobic006G012500 Sobic006G126100--Sobic006G012500 Sobic004G135400 Sobic004G135400 Sobic006G126100--Sobic004G135400 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500 Sobic007G120500--Sobic001G369000 Sobic007G120500--Sobic004G039600 Sobic007G120500--Sobic007G132100 Sobic007G120500--Sobic006G012500 Sobic003G057700 Sobic003G057700 Sobic007G120500--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic007G120500--Sobic003G249600 Sobic004G072100 Sobic004G072100 Sobic007G120500--Sobic004G072100 Sobic007G120500--Sobic010G053800 Sobic007G120500--Sobic003G394200 Sobic001G323000 Sobic001G323000 Sobic006G194500--Sobic001G323000 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic009G138100 Sobic009G138100 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G148200 Sobic006G148200 Sobic006G194500--Sobic006G148200 Sobic001G466700 Sobic001G466700 Sobic006G194500--Sobic001G466700 Sobic002G418700 Sobic002G418700 Sobic006G194500--Sobic002G418700 Sobic006G249700 Sobic006G249700 Sobic006G194500--Sobic006G249700
Octagon: transcription factors


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