Gene annotation
Transcriptome id Sobic.002G361300.1
Synonym Sb02g038150
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5XD58
Pfam PF14543 PF14541
Panther DB PTHR13683 PTHR13683:SF342
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G43100 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os07g40260.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015080 , Zm00025a048611
Brachypodium KQK15446
Barley HORVU2Hr1G034720.4 , HORVU2Hr1G034720.2 , HORVU2Hr1G034720.3 , HORVU2Hr1G034720.1
Wheat TraesCS2B02G210700 , TraesCS2B02G210700 , TraesCS2D02G192000 , TraesCS2A02G195800
Populus -


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cDNA sequences
Sobic.002G361300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G394600 expressed protein -
2 Sobic.009G257200 CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
3 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
4 Sobic.001G127000 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
5 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
6 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
7 Sobic.001G114000 expressed protein -
8 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
9 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
10 Sobic.003G400100 leaf senescence related protein, putative, expressed -
11 Sobic.007G132100 myrosinase precursor, putative, expressed -
12 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
13 Sobic.004G002400 expressed protein -
14 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
16 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
18 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
19 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
20 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1


Gene co-expression network
sample Sobic002G361300 Sobic002G361300 Sobic001G394600 Sobic001G394600 Sobic002G361300--Sobic001G394600 Sobic009G257200 Sobic009G257200 Sobic002G361300--Sobic009G257200 Sobic010G205800 Sobic010G205800 Sobic002G361300--Sobic010G205800 Sobic001G127000 Sobic001G127000 Sobic002G361300--Sobic001G127000 Sobic007G120500 Sobic007G120500 Sobic002G361300--Sobic007G120500 Sobic009G224000 Sobic009G224000 Sobic002G361300--Sobic009G224000 Sobic001G114000 Sobic001G114000 Sobic002G361300--Sobic001G114000 Sobic004G039600 Sobic004G039600 Sobic002G361300--Sobic004G039600 Sobic004G358600 Sobic004G358600 Sobic002G361300--Sobic004G358600 Sobic001G394600--Sobic002G361300 Sobic001G120300 Sobic001G120300 Sobic001G394600--Sobic001G120300 Sobic006G114500 Sobic006G114500 Sobic001G394600--Sobic006G114500 Sobic004G339100 Sobic004G339100 Sobic001G394600--Sobic004G339100 Sobic001G394600--Sobic010G205800 Sobic001G201400 Sobic001G201400 Sobic001G394600--Sobic001G201400 Sobic007G024700 Sobic007G024700 Sobic001G394600--Sobic007G024700 Sobic001G000200 Sobic001G000200 Sobic001G394600--Sobic001G000200 Sobic004G158700 Sobic004G158700 Sobic001G394600--Sobic004G158700 Sobic003G187200 Sobic003G187200 Sobic009G257200--Sobic003G187200 Sobic009G228700 Sobic009G228700 Sobic009G257200--Sobic009G228700 Sobic009G257200--Sobic004G039600 Sobic009G257200--Sobic002G361300 Sobic007G132100 Sobic007G132100 Sobic009G257200--Sobic007G132100 Sobic010G261600 Sobic010G261600 Sobic009G257200--Sobic010G261600 Sobic002G378200 Sobic002G378200 Sobic009G257200--Sobic002G378200 Sobic002G303600 Sobic002G303600 Sobic009G257200--Sobic002G303600 Sobic009G257200--Sobic001G127000 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic001G390800 Sobic001G390800 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic001G079200 Sobic001G079200 Sobic010G205800--Sobic001G079200 Sobic001G127000--Sobic009G257200 Sobic001G127000--Sobic002G361300 Sobic002G067600 Sobic002G067600 Sobic001G127000--Sobic002G067600 Sobic003G270600 Sobic003G270600 Sobic001G127000--Sobic003G270600 Sobic001G127000--Sobic003G187200 Sobic004G003501 Sobic004G003501 Sobic001G127000--Sobic004G003501 Sobic006G126100 Sobic006G126100 Sobic001G127000--Sobic006G126100 Sobic001G127000--Sobic007G120500 Sobic006G194500 Sobic006G194500 Sobic001G127000--Sobic006G194500 Sobic001G369000 Sobic001G369000 Sobic007G120500--Sobic001G369000 Sobic007G120500--Sobic004G039600 Sobic007G120500--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic007G120500--Sobic006G012500 Sobic003G057700 Sobic003G057700 Sobic007G120500--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic007G120500--Sobic003G249600 Sobic004G072100 Sobic004G072100 Sobic007G120500--Sobic004G072100 Sobic010G053800 Sobic010G053800 Sobic007G120500--Sobic010G053800 Sobic003G394200 Sobic003G394200 Sobic007G120500--Sobic003G394200 Sobic003G338500 Sobic003G338500 Sobic009G224000--Sobic003G338500 Sobic010G243400 Sobic010G243400 Sobic009G224000--Sobic010G243400 Sobic007G056100 Sobic007G056100 Sobic009G224000--Sobic007G056100 Sobic009G224000--Sobic002G361300 Sobic004G130400 Sobic004G130400 Sobic009G224000--Sobic004G130400 Sobic009G224000--Sobic010G261600 Sobic009G224000--Sobic003G394200 Sobic009G224000--Sobic003G270600 Sobic008G173400 Sobic008G173400 Sobic009G224000--Sobic008G173400 Sobic007G217000 Sobic007G217000 Sobic001G114000--Sobic007G217000 Sobic002G112700 Sobic002G112700 Sobic001G114000--Sobic002G112700 Sobic001G065000 Sobic001G065000 Sobic001G114000--Sobic001G065000 Sobic004G067700 Sobic004G067700 Sobic001G114000--Sobic004G067700 Sobic009G166300 Sobic009G166300 Sobic001G114000--Sobic009G166300 Sobic008G047800 Sobic008G047800 Sobic001G114000--Sobic008G047800 Sobic001G114000--Sobic004G072100 Sobic005G118600 Sobic005G118600 Sobic001G114000--Sobic005G118600 Sobic009G126400 Sobic009G126400 Sobic001G114000--Sobic009G126400 Sobic004G039600--Sobic006G012500 Sobic004G039600--Sobic001G369000 Sobic004G039600--Sobic007G132100 Sobic008G099800 Sobic008G099800 Sobic004G039600--Sobic008G099800 Sobic004G039600--Sobic006G126100 Sobic004G039600--Sobic010G053800 Sobic006G131000 Sobic006G131000 Sobic004G039600--Sobic006G131000 Sobic001G534800 Sobic001G534800 Sobic004G039600--Sobic001G534800 Sobic004G039600--Sobic007G120500 Sobic005G044800 Sobic005G044800 Sobic004G358600--Sobic005G044800 Sobic003G012200 Sobic003G012200 Sobic004G358600--Sobic003G012200 Sobic004G358600--Sobic001G000200 Sobic004G358600--Sobic010G205800 Sobic010G002400 Sobic010G002400 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic004G358600--Sobic002G361300 Sobic003G372000 Sobic003G372000 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200
Octagon: transcription factors


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