Gene annotation
Transcriptome id Sobic.007G213000.1
Synonym Sb07g028020, ATXYLT, XYLT
Functional annotation beta 1,2-xylosyltransferase, putative, expressed
UniProt C5YJ43 , Q2UVB6
Pfam PF04577
Panther DB PTHR20961 PTHR20961:SF6
NCBI CDD KOG4698; Uncharacterized conserved protein
KEGG Orthology K03714; glycoprotein 2-beta-D-xylosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT5G55500 : beta-1,2-xylosyltransferase
RAP-DB (Rice) LOC_Os08g39380.1 : beta 1,2-xylosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a005045
Brachypodium KQJ98894 , KQJ98895 , PNT68380
Barley HORVU7Hr1G050000.8 , HORVU7Hr1G050000.9 , HORVU7Hr1G050000.5 , HORVU7Hr1G050000.6 , HORVU7Hr1G050000.7
Wheat TraesCS7A02G244100 , TraesCS7B02G146900 , TraesCS7D02G242700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G127000 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
2 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
3 Sobic.003G427600 villin protein, putative, expressed -
4 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
5 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
6 Sobic.009G122500 expressed protein -
7 Sobic.009G229600 tRNA-binding arm, putative, expressed -
8 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
9 Sobic.003G392550 - -
10 Sobic.009G249700 expressed protein -
11 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
13 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
14 Sobic.003G243700 vacuolar protein-sorting-associated protein 25, putative, expressed K12189: VPS25, ESCRT-II complex subunit VPS25
15 Sobic.003G187200 phox domain-containing protein, putative, expressed -
16 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
17 Sobic.007G010000 OsFBL6 - F-box domain and LRR containing protein, expressed -
18 Sobic.006G082900 expressed protein -
19 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
20 Sobic.001G114000 expressed protein -


Gene co-expression network
sample Sobic007G213000 Sobic007G213000 Sobic001G127000 Sobic001G127000 Sobic007G213000--Sobic001G127000 Sobic002G370900 Sobic002G370900 Sobic007G213000--Sobic002G370900 Sobic003G427600 Sobic003G427600 Sobic007G213000--Sobic003G427600 Sobic003G036500 Sobic003G036500 Sobic007G213000--Sobic003G036500 Sobic003G270600 Sobic003G270600 Sobic007G213000--Sobic003G270600 Sobic009G122500 Sobic009G122500 Sobic007G213000--Sobic009G122500 Sobic009G229600 Sobic009G229600 Sobic007G213000--Sobic009G229600 Sobic004G178200 Sobic004G178200 Sobic007G213000--Sobic004G178200 Sobic003G392550 Sobic003G392550 Sobic007G213000--Sobic003G392550 Sobic009G257200 Sobic009G257200 Sobic001G127000--Sobic009G257200 Sobic002G361300 Sobic002G361300 Sobic001G127000--Sobic002G361300 Sobic002G067600 Sobic002G067600 Sobic001G127000--Sobic002G067600 Sobic001G127000--Sobic003G270600 Sobic003G187200 Sobic003G187200 Sobic001G127000--Sobic003G187200 Sobic004G003501 Sobic004G003501 Sobic001G127000--Sobic004G003501 Sobic006G126100 Sobic006G126100 Sobic001G127000--Sobic006G126100 Sobic007G120500 Sobic007G120500 Sobic001G127000--Sobic007G120500 Sobic006G194500 Sobic006G194500 Sobic001G127000--Sobic006G194500 Sobic001G176200 Sobic001G176200 Sobic002G370900--Sobic001G176200 Sobic006G082900 Sobic006G082900 Sobic002G370900--Sobic006G082900 Sobic004G067700 Sobic004G067700 Sobic002G370900--Sobic004G067700 Sobic006G173100 Sobic006G173100 Sobic002G370900--Sobic006G173100 Sobic003G008500 Sobic003G008500 Sobic002G370900--Sobic003G008500 Sobic002G260400 Sobic002G260400 Sobic002G370900--Sobic002G260400 Sobic002G310200 Sobic002G310200 Sobic002G370900--Sobic002G310200 Sobic002G197100 Sobic002G197100 Sobic002G370900--Sobic002G197100 Sobic004G345700 Sobic004G345700 Sobic002G370900--Sobic004G345700 Sobic003G427600--Sobic009G229600 Sobic006G131000 Sobic006G131000 Sobic003G427600--Sobic006G131000 Sobic003G427600--Sobic003G270600 Sobic004G236200 Sobic004G236200 Sobic003G427600--Sobic004G236200 Sobic001G369000 Sobic001G369000 Sobic003G427600--Sobic001G369000 Sobic001G281100 Sobic001G281100 Sobic003G427600--Sobic001G281100 Sobic006G077300 Sobic006G077300 Sobic003G427600--Sobic006G077300 Sobic004G344901 Sobic004G344901 Sobic003G427600--Sobic004G344901 Sobic009G049400 Sobic009G049400 Sobic003G427600--Sobic009G049400 Sobic006G203300 Sobic006G203300 Sobic003G036500--Sobic006G203300 Sobic004G254800 Sobic004G254800 Sobic003G036500--Sobic004G254800 Sobic010G169900 Sobic010G169900 Sobic003G036500--Sobic010G169900 Sobic003G036500--Sobic009G122500 Sobic003G409900 Sobic003G409900 Sobic003G036500--Sobic003G409900 Sobic004G263500 Sobic004G263500 Sobic003G036500--Sobic004G263500 Sobic009G128500 Sobic009G128500 Sobic003G036500--Sobic009G128500 Sobic006G060000 Sobic006G060000 Sobic003G036500--Sobic006G060000 Sobic004G100200 Sobic004G100200 Sobic003G036500--Sobic004G100200 Sobic003G270600--Sobic004G236200 Sobic003G394200 Sobic003G394200 Sobic003G270600--Sobic003G394200 Sobic003G270600--Sobic009G229600 Sobic003G270600--Sobic003G427600 Sobic009G226400 Sobic009G226400 Sobic003G270600--Sobic009G226400 Sobic004G039600 Sobic004G039600 Sobic003G270600--Sobic004G039600 Sobic003G270600--Sobic001G369000 Sobic003G270600--Sobic009G049400 Sobic004G228800 Sobic004G228800 Sobic003G270600--Sobic004G228800 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic009G229600--Sobic009G049400 Sobic009G229600--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic009G229600--Sobic001G335900 Sobic009G229600--Sobic003G427600 Sobic009G229600--Sobic003G270600 Sobic006G202200 Sobic006G202200 Sobic009G229600--Sobic006G202200 Sobic001G518400 Sobic001G518400 Sobic009G229600--Sobic001G518400 Sobic009G229600--Sobic004G039600 Sobic009G229600--Sobic007G120500 Sobic007G132100 Sobic007G132100 Sobic004G178200--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic004G178200--Sobic006G131000 Sobic004G178200--Sobic006G126100 Sobic006G012500 Sobic006G012500 Sobic004G178200--Sobic006G012500 Sobic010G116600 Sobic010G116600 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G178200--Sobic004G039600 Sobic003G392550--Sobic009G122500 Sobic003G346400 Sobic003G346400 Sobic003G392550--Sobic003G346400 Sobic003G392550--Sobic003G036500 Sobic001G012900 Sobic001G012900 Sobic003G392550--Sobic001G012900 Sobic001G085700 Sobic001G085700 Sobic003G392550--Sobic001G085700 Sobic003G392550--Sobic004G254800 Sobic003G392550--Sobic001G335000 Sobic003G392550--Sobic004G060300 Sobic002G115500 Sobic002G115500 Sobic003G392550--Sobic002G115500
Octagon: transcription factors


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