Gene annotation
Transcriptome id Sobic.001G451901.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAM9
Pfam PF16029
Panther DB PTHR35455 PTHR35455:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17610 : -
RAP-DB (Rice) LOC_Os03g12238.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G066920.41 , HORVU4Hr1G066920.28 , HORVU4Hr1G066920.21 , HORVU4Hr1G066920.22 , HORVU4Hr1G066920.25 , HORVU4Hr1G066920.2 , HORVU4Hr1G066920.14 , HORVU4Hr1G066920.16 , HORVU4Hr1G066920.12
Wheat TraesCS4D02G241200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G110300 fb27, putative, expressed -
2 Sobic.001G060300 expressed protein -
3 Sobic.004G184000 SFT2, putative, expressed -
4 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
5 Sobic.003G283300 expressed protein -
6 Sobic.010G194200 expressed protein -
7 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
8 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
9 Sobic.003G217100 Yip1 domain containing protein, expressed -
10 Sobic.003G326900 expressed protein -
11 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
12 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
13 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
14 Sobic.009G168000 selT-like protein precursor, putative, expressed -
15 Sobic.001G332300 expressed protein -
16 Sobic.005G105500 expressed protein -
17 Sobic.002G422400 adenylate cyclase family protein, expressed -
18 Sobic.001G214900 expressed protein -
19 Sobic.009G001900 expressed protein -
20 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30


Gene co-expression network
sample Sobic001G451901 Sobic001G451901 Sobic001G110300 Sobic001G110300 Sobic001G451901--Sobic001G110300 Sobic001G060300 Sobic001G060300 Sobic001G451901--Sobic001G060300 Sobic004G184000 Sobic004G184000 Sobic001G451901--Sobic004G184000 Sobic001G129400 Sobic001G129400 Sobic001G451901--Sobic001G129400 Sobic003G283300 Sobic003G283300 Sobic001G451901--Sobic003G283300 Sobic010G194200 Sobic010G194200 Sobic001G451901--Sobic010G194200 Sobic004G262300 Sobic004G262300 Sobic001G451901--Sobic004G262300 Sobic004G025300 Sobic004G025300 Sobic001G451901--Sobic004G025300 Sobic003G217100 Sobic003G217100 Sobic001G451901--Sobic003G217100 Sobic004G106700 Sobic004G106700 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic003G305100 Sobic003G305100 Sobic001G110300--Sobic003G305100 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G110300--Sobic001G129400 Sobic006G231500 Sobic006G231500 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200 Sobic001G342200 Sobic001G342200 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic004G184000--Sobic001G110300 Sobic001G116000 Sobic001G116000 Sobic004G184000--Sobic001G116000 Sobic001G129400--Sobic003G326900 Sobic003G003000 Sobic003G003000 Sobic001G129400--Sobic003G003000 Sobic001G129400--Sobic010G194200 Sobic001G008800 Sobic001G008800 Sobic001G129400--Sobic001G008800 Sobic004G248900 Sobic004G248900 Sobic001G129400--Sobic004G248900 Sobic010G018000 Sobic010G018000 Sobic001G129400--Sobic010G018000 Sobic001G129400--Sobic001G451901 Sobic001G129400--Sobic001G060300 Sobic001G473400 Sobic001G473400 Sobic001G129400--Sobic001G473400 Sobic003G283300--Sobic001G451901 Sobic002G241500 Sobic002G241500 Sobic003G283300--Sobic002G241500 Sobic003G283300--Sobic001G110300 Sobic010G197900 Sobic010G197900 Sobic003G283300--Sobic010G197900 Sobic004G113700 Sobic004G113700 Sobic003G283300--Sobic004G113700 Sobic003G283300--Sobic007G217400 Sobic003G283300--Sobic006G231500 Sobic009G001900 Sobic009G001900 Sobic003G283300--Sobic009G001900 Sobic006G181700 Sobic006G181700 Sobic003G283300--Sobic006G181700 Sobic010G194200--Sobic001G129400 Sobic010G194200--Sobic001G060300 Sobic010G194200--Sobic003G326900 Sobic010G194200--Sobic001G451901 Sobic010G194200--Sobic001G473400 Sobic005G132700 Sobic005G132700 Sobic010G194200--Sobic005G132700 Sobic010G194200--Sobic004G106700 Sobic006G153200 Sobic006G153200 Sobic010G194200--Sobic006G153200 Sobic010G194200--Sobic001G110300 Sobic004G202100 Sobic004G202100 Sobic004G262300--Sobic004G202100 Sobic004G262300--Sobic001G060300 Sobic004G262300--Sobic001G342200 Sobic001G031900 Sobic001G031900 Sobic004G262300--Sobic001G031900 Sobic010G038700 Sobic010G038700 Sobic004G262300--Sobic010G038700 Sobic004G262300--Sobic009G001900 Sobic004G066800 Sobic004G066800 Sobic004G262300--Sobic004G066800 Sobic002G131600 Sobic002G131600 Sobic004G262300--Sobic002G131600 Sobic007G092100 Sobic007G092100 Sobic004G262300--Sobic007G092100 Sobic001G332300 Sobic001G332300 Sobic004G025300--Sobic001G332300 Sobic005G184200 Sobic005G184200 Sobic004G025300--Sobic005G184200 Sobic004G207900 Sobic004G207900 Sobic004G025300--Sobic004G207900 Sobic008G110500 Sobic008G110500 Sobic004G025300--Sobic008G110500 Sobic001G378200 Sobic001G378200 Sobic004G025300--Sobic001G378200 Sobic006G083100 Sobic006G083100 Sobic004G025300--Sobic006G083100 Sobic004G025300--Sobic001G451901 Sobic005G207400 Sobic005G207400 Sobic004G025300--Sobic005G207400 Sobic001G408100 Sobic001G408100 Sobic004G025300--Sobic001G408100 Sobic001G105100 Sobic001G105100 Sobic003G217100--Sobic001G105100 Sobic002G090700 Sobic002G090700 Sobic003G217100--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic003G217100--Sobic008G132800 Sobic006G222400 Sobic006G222400 Sobic003G217100--Sobic006G222400 Sobic001G309500 Sobic001G309500 Sobic003G217100--Sobic001G309500 Sobic001G067900 Sobic001G067900 Sobic003G217100--Sobic001G067900 Sobic003G217100--Sobic005G184200 Sobic001G237500 Sobic001G237500 Sobic003G217100--Sobic001G237500 Sobic003G217100--Sobic001G408100
Octagon: transcription factors


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