Gene annotation
Transcriptome id Sobic.010G194200.1
Synonym Sb10g024360
Functional annotation expressed protein
UniProt C5Z654
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18510 : -
RAP-DB (Rice) LOC_Os06g41410.1 : expressed protein
MaizeGDB (Corn) Zm00025a051529
Brachypodium -
Barley HORVU3Hr1G023660.1 , HORVU5Hr1G005850.1 , HORVU3Hr1G023180.1 , HORVU7Hr1G094320.1
Wheat TraesCS7A02G402100 , TraesCS7D02G395900 , TraesCS7B02G302200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
2 Sobic.001G060300 expressed protein -
3 Sobic.003G326900 expressed protein -
4 Sobic.001G451901 - -
5 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
6 Sobic.005G132700 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
7 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
8 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.001G110300 fb27, putative, expressed -
10 Sobic.010G039000 expressed protein -
11 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
12 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
13 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
14 Sobic.001G214900 expressed protein -
15 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
16 Sobic.001G198200 CRP3 - Cysteine-rich family protein precursor, expressed -
17 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
18 Sobic.009G218000 VIP1 protein, putative, expressed -
19 Sobic.005G110526 - -
20 Sobic.004G184000 SFT2, putative, expressed -


Gene co-expression network
sample Sobic010G194200 Sobic010G194200 Sobic001G129400 Sobic001G129400 Sobic010G194200--Sobic001G129400 Sobic001G060300 Sobic001G060300 Sobic010G194200--Sobic001G060300 Sobic003G326900 Sobic003G326900 Sobic010G194200--Sobic003G326900 Sobic001G451901 Sobic001G451901 Sobic010G194200--Sobic001G451901 Sobic001G473400 Sobic001G473400 Sobic010G194200--Sobic001G473400 Sobic005G132700 Sobic005G132700 Sobic010G194200--Sobic005G132700 Sobic004G106700 Sobic004G106700 Sobic010G194200--Sobic004G106700 Sobic006G153200 Sobic006G153200 Sobic010G194200--Sobic006G153200 Sobic001G110300 Sobic001G110300 Sobic010G194200--Sobic001G110300 Sobic001G129400--Sobic003G326900 Sobic003G003000 Sobic003G003000 Sobic001G129400--Sobic003G003000 Sobic001G129400--Sobic010G194200 Sobic001G008800 Sobic001G008800 Sobic001G129400--Sobic001G008800 Sobic004G248900 Sobic004G248900 Sobic001G129400--Sobic004G248900 Sobic010G018000 Sobic010G018000 Sobic001G129400--Sobic010G018000 Sobic001G129400--Sobic001G451901 Sobic001G129400--Sobic001G060300 Sobic001G129400--Sobic001G473400 Sobic001G342200 Sobic001G342200 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic004G262300 Sobic004G262300 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic003G326900--Sobic001G129400 Sobic003G326900--Sobic002G402500 Sobic003G326900--Sobic001G060300 Sobic003G326900--Sobic001G008800 Sobic004G184000 Sobic004G184000 Sobic003G326900--Sobic004G184000 Sobic003G326900--Sobic010G194200 Sobic003G326900--Sobic010G018000 Sobic003G326900--Sobic004G248900 Sobic003G326900--Sobic001G214900 Sobic001G451901--Sobic001G110300 Sobic001G451901--Sobic001G060300 Sobic001G451901--Sobic004G184000 Sobic001G451901--Sobic001G129400 Sobic003G283300 Sobic003G283300 Sobic001G451901--Sobic003G283300 Sobic001G451901--Sobic010G194200 Sobic001G451901--Sobic004G262300 Sobic004G025300 Sobic004G025300 Sobic001G451901--Sobic004G025300 Sobic003G217100 Sobic003G217100 Sobic001G451901--Sobic003G217100 Sobic010G258000 Sobic010G258000 Sobic001G473400--Sobic010G258000 Sobic003G170300 Sobic003G170300 Sobic001G473400--Sobic003G170300 Sobic009G016500 Sobic009G016500 Sobic001G473400--Sobic009G016500 Sobic009G240700 Sobic009G240700 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G282500 Sobic001G282500 Sobic001G473400--Sobic001G282500 Sobic002G395000 Sobic002G395000 Sobic001G473400--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G473400--Sobic002G308300 Sobic005G132700--Sobic002G402500 Sobic002G253100 Sobic002G253100 Sobic005G132700--Sobic002G253100 Sobic005G132700--Sobic010G194200 Sobic005G132700--Sobic001G060300 Sobic005G132700--Sobic001G451901 Sobic005G132700--Sobic001G214900 Sobic005G132700--Sobic001G473400 Sobic005G132700--Sobic010G258000 Sobic005G132700--Sobic003G326900 Sobic004G106700--Sobic001G110300 Sobic003G305100 Sobic003G305100 Sobic004G106700--Sobic003G305100 Sobic004G106700--Sobic001G060300 Sobic004G106700--Sobic001G451901 Sobic006G231500 Sobic006G231500 Sobic004G106700--Sobic006G231500 Sobic004G106700--Sobic010G194200 Sobic004G106700--Sobic001G129400 Sobic004G244000 Sobic004G244000 Sobic004G106700--Sobic004G244000 Sobic009G024500 Sobic009G024500 Sobic004G106700--Sobic009G024500 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic002G217500 Sobic002G217500 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic003G167000 Sobic003G167000 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic001G110300--Sobic003G305100 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G110300--Sobic001G129400 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200
Octagon: transcription factors


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