Gene annotation
Transcriptome id Sobic.010G039000.1
Synonym Sb10g003470
Functional annotation expressed protein
UniProt C5Z496
Pfam -
Panther DB PTHR38355
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48200 : -
RAP-DB (Rice) LOC_Os06g05670.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK19854
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G039000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G225201 - -
2 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
3 Sobic.009G077100 expressed protein -
4 Sobic.009G218000 VIP1 protein, putative, expressed -
5 Sobic.010G194200 expressed protein -
6 Sobic.002G345000 expressed protein -
7 Sobic.004G011433 - -
8 Sobic.007G219500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
9 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
10 Sobic.003G167000 protein phosphotase protein, putative, expressed -
11 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
12 Sobic.001G060300 expressed protein -
13 Sobic.010G159000 expressed protein -
14 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
15 Sobic.003G194300 50S ribosomal protein, putative, expressed K02914: RP-L34, MRPL34, large subunit ribosomal protein L34
16 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
17 Sobic.002G366800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
18 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
19 Sobic.002G422400 adenylate cyclase family protein, expressed -
20 Sobic.004G100100 expressed protein -


Gene co-expression network
sample Sobic010G039000 Sobic010G039000 Sobic010G225201 Sobic010G225201 Sobic010G039000--Sobic010G225201 Sobic009G050000 Sobic009G050000 Sobic010G039000--Sobic009G050000 Sobic009G077100 Sobic009G077100 Sobic010G039000--Sobic009G077100 Sobic009G218000 Sobic009G218000 Sobic010G039000--Sobic009G218000 Sobic010G194200 Sobic010G194200 Sobic010G039000--Sobic010G194200 Sobic002G345000 Sobic002G345000 Sobic010G039000--Sobic002G345000 Sobic004G011433 Sobic004G011433 Sobic010G039000--Sobic004G011433 Sobic007G219500 Sobic007G219500 Sobic010G039000--Sobic007G219500 Sobic001G031800 Sobic001G031800 Sobic010G039000--Sobic001G031800 Sobic002G034750 Sobic002G034750 Sobic010G225201--Sobic002G034750 Sobic010G225201--Sobic010G039000 Sobic001G504500 Sobic001G504500 Sobic010G225201--Sobic001G504500 Sobic008G006000 Sobic008G006000 Sobic010G225201--Sobic008G006000 Sobic010G255900 Sobic010G255900 Sobic010G225201--Sobic010G255900 Sobic002G397900 Sobic002G397900 Sobic010G225201--Sobic002G397900 Sobic004G100100 Sobic004G100100 Sobic010G225201--Sobic004G100100 Sobic005G170000 Sobic005G170000 Sobic010G225201--Sobic005G170000 Sobic010G225201--Sobic007G219500 Sobic009G050000--Sobic009G077100 Sobic009G050000--Sobic010G039000 Sobic003G116600 Sobic003G116600 Sobic009G050000--Sobic003G116600 Sobic004G159000 Sobic004G159000 Sobic009G050000--Sobic004G159000 Sobic003G167000 Sobic003G167000 Sobic009G050000--Sobic003G167000 Sobic002G368400 Sobic002G368400 Sobic009G050000--Sobic002G368400 Sobic005G019100 Sobic005G019100 Sobic009G050000--Sobic005G019100 Sobic010G178800 Sobic010G178800 Sobic009G050000--Sobic010G178800 Sobic007G141100 Sobic007G141100 Sobic009G050000--Sobic007G141100 Sobic009G077100--Sobic001G031800 Sobic009G024500 Sobic009G024500 Sobic009G077100--Sobic009G024500 Sobic009G077100--Sobic009G050000 Sobic009G077100--Sobic007G141100 Sobic001G148700 Sobic001G148700 Sobic009G077100--Sobic001G148700 Sobic002G246800 Sobic002G246800 Sobic009G077100--Sobic002G246800 Sobic001G067601 Sobic001G067601 Sobic009G077100--Sobic001G067601 Sobic003G305100 Sobic003G305100 Sobic009G077100--Sobic003G305100 Sobic001G100400 Sobic001G100400 Sobic009G077100--Sobic001G100400 Sobic006G153200 Sobic006G153200 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic009G218000--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic001G352800 Sobic001G352800 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic008G011800 Sobic008G011800 Sobic009G218000--Sobic008G011800 Sobic001G129400 Sobic001G129400 Sobic010G194200--Sobic001G129400 Sobic001G060300 Sobic001G060300 Sobic010G194200--Sobic001G060300 Sobic003G326900 Sobic003G326900 Sobic010G194200--Sobic003G326900 Sobic001G451901 Sobic001G451901 Sobic010G194200--Sobic001G451901 Sobic001G473400 Sobic001G473400 Sobic010G194200--Sobic001G473400 Sobic005G132700 Sobic005G132700 Sobic010G194200--Sobic005G132700 Sobic004G106700 Sobic004G106700 Sobic010G194200--Sobic004G106700 Sobic010G194200--Sobic006G153200 Sobic001G110300 Sobic001G110300 Sobic010G194200--Sobic001G110300 Sobic003G202400 Sobic003G202400 Sobic002G345000--Sobic003G202400 Sobic003G137600 Sobic003G137600 Sobic002G345000--Sobic003G137600 Sobic002G345000--Sobic007G219500 Sobic003G212000 Sobic003G212000 Sobic002G345000--Sobic003G212000 Sobic002G345000--Sobic010G225201 Sobic002G345000--Sobic004G100100 Sobic004G173700 Sobic004G173700 Sobic002G345000--Sobic004G173700 Sobic003G284100 Sobic003G284100 Sobic002G345000--Sobic003G284100 Sobic004G165200 Sobic004G165200 Sobic002G345000--Sobic004G165200 Sobic004G011433--Sobic010G039000 Sobic004G011433--Sobic010G225201 Sobic001G250600 Sobic001G250600 Sobic004G011433--Sobic001G250600 Sobic004G011433--Sobic004G106700 Sobic004G011433--Sobic002G345000 Sobic004G011433--Sobic002G034750 Sobic004G011433--Sobic010G194200 Sobic004G011433--Sobic001G451901 Sobic002G335400 Sobic002G335400 Sobic004G011433--Sobic002G335400 Sobic002G113200 Sobic002G113200 Sobic007G219500--Sobic002G113200 Sobic007G219500--Sobic003G284100 Sobic007G219500--Sobic004G173700 Sobic003G005100 Sobic003G005100 Sobic007G219500--Sobic003G005100 Sobic008G188400 Sobic008G188400 Sobic007G219500--Sobic008G188400 Sobic007G219500--Sobic003G212000 Sobic010G159000 Sobic010G159000 Sobic007G219500--Sobic010G159000 Sobic007G219500--Sobic005G019100 Sobic004G247700 Sobic004G247700 Sobic007G219500--Sobic004G247700 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic004G260200 Sobic004G260200 Sobic001G031800--Sobic004G260200 Sobic007G013900 Sobic007G013900 Sobic001G031800--Sobic007G013900 Sobic002G309700 Sobic002G309700 Sobic001G031800--Sobic002G309700 Sobic001G031800--Sobic002G246800 Sobic008G136800 Sobic008G136800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001
Octagon: transcription factors


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