Gene annotation
Transcriptome id Sobic.009G050000.2
Synonym Sb09g004260
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A1Z5R1P6
Pfam PF16891 PF00149
Panther DB PTHR11668 PTHR11668:SF262
NCBI CDD KOG0374; Serine/threonine specific protein phosphatase PP1, catalytic subunit
KEGG Orthology K06269; serine/threonine-protein phosphatase PP1 catalytic subunit
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G05580 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os01g24750.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036905 , Zm00025a043000
Brachypodium KQK07410 , KQK04258
Barley HORVU1Hr1G022370.1 , HORVU1Hr1G022370.3 , HORVU1Hr1G022370.2 , HORVU1Hr1G022370.5 , HORVU1Hr1G022370.4 , HORVU1Hr1G022370.7 , HORVU1Hr1G022370.6 , HORVU1Hr1G022370.9 , HORVU1Hr1G022370.8
Wheat TraesCS3B02G226800 , TraesCS1B02G128100 , TraesCS1D02G104400 , TraesCS1A02G095500 , TraesCS1A02G095500 , TraesCS3D02G199300 , TraesCS1D02G104400
Populus -


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cDNA sequences
Sobic.009G050000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G077100 expressed protein -
2 Sobic.010G039000 expressed protein -
3 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
4 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
5 Sobic.003G167000 protein phosphotase protein, putative, expressed -
6 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
7 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
8 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
9 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
10 Sobic.002G345000 expressed protein -
11 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
12 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.002G260200 - -
14 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
15 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
16 Sobic.002G428600 methyltransferase domain containing protein, expressed -
17 Sobic.007G219500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
18 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
19 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
20 Sobic.001G496500 MTN26L2 - MtN26 family protein precursor, expressed -


Gene co-expression network
sample Sobic009G050000 Sobic009G050000 Sobic009G077100 Sobic009G077100 Sobic009G050000--Sobic009G077100 Sobic010G039000 Sobic010G039000 Sobic009G050000--Sobic010G039000 Sobic003G116600 Sobic003G116600 Sobic009G050000--Sobic003G116600 Sobic004G159000 Sobic004G159000 Sobic009G050000--Sobic004G159000 Sobic003G167000 Sobic003G167000 Sobic009G050000--Sobic003G167000 Sobic002G368400 Sobic002G368400 Sobic009G050000--Sobic002G368400 Sobic005G019100 Sobic005G019100 Sobic009G050000--Sobic005G019100 Sobic010G178800 Sobic010G178800 Sobic009G050000--Sobic010G178800 Sobic007G141100 Sobic007G141100 Sobic009G050000--Sobic007G141100 Sobic001G031800 Sobic001G031800 Sobic009G077100--Sobic001G031800 Sobic009G024500 Sobic009G024500 Sobic009G077100--Sobic009G024500 Sobic009G077100--Sobic009G050000 Sobic009G077100--Sobic007G141100 Sobic001G148700 Sobic001G148700 Sobic009G077100--Sobic001G148700 Sobic002G246800 Sobic002G246800 Sobic009G077100--Sobic002G246800 Sobic001G067601 Sobic001G067601 Sobic009G077100--Sobic001G067601 Sobic003G305100 Sobic003G305100 Sobic009G077100--Sobic003G305100 Sobic001G100400 Sobic001G100400 Sobic009G077100--Sobic001G100400 Sobic010G225201 Sobic010G225201 Sobic010G039000--Sobic010G225201 Sobic010G039000--Sobic009G050000 Sobic010G039000--Sobic009G077100 Sobic009G218000 Sobic009G218000 Sobic010G039000--Sobic009G218000 Sobic010G194200 Sobic010G194200 Sobic010G039000--Sobic010G194200 Sobic002G345000 Sobic002G345000 Sobic010G039000--Sobic002G345000 Sobic004G011433 Sobic004G011433 Sobic010G039000--Sobic004G011433 Sobic007G219500 Sobic007G219500 Sobic010G039000--Sobic007G219500 Sobic010G039000--Sobic001G031800 Sobic002G090700 Sobic002G090700 Sobic003G116600--Sobic002G090700 Sobic010G007400 Sobic010G007400 Sobic003G116600--Sobic010G007400 Sobic005G184200 Sobic005G184200 Sobic003G116600--Sobic005G184200 Sobic003G116600--Sobic004G159000 Sobic004G339300 Sobic004G339300 Sobic003G116600--Sobic004G339300 Sobic001G367000 Sobic001G367000 Sobic003G116600--Sobic001G367000 Sobic004G202100 Sobic004G202100 Sobic003G116600--Sobic004G202100 Sobic001G309500 Sobic001G309500 Sobic003G116600--Sobic001G309500 Sobic002G401700 Sobic002G401700 Sobic003G116600--Sobic002G401700 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic004G159000--Sobic010G007400 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic003G332401 Sobic003G332401 Sobic002G368400--Sobic003G332401 Sobic002G368400--Sobic003G116600 Sobic009G199700 Sobic009G199700 Sobic002G368400--Sobic009G199700 Sobic009G059700 Sobic009G059700 Sobic002G368400--Sobic009G059700 Sobic002G368400--Sobic001G367000 Sobic001G526100 Sobic001G526100 Sobic002G368400--Sobic001G526100 Sobic001G283500 Sobic001G283500 Sobic002G368400--Sobic001G283500 Sobic007G195701 Sobic007G195701 Sobic002G368400--Sobic007G195701 Sobic002G368400--Sobic001G309500 Sobic003G129900 Sobic003G129900 Sobic005G019100--Sobic003G129900 Sobic004G256700 Sobic004G256700 Sobic005G019100--Sobic004G256700 Sobic001G387200 Sobic001G387200 Sobic005G019100--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic005G019100--Sobic006G120900 Sobic004G173700 Sobic004G173700 Sobic005G019100--Sobic004G173700 Sobic001G518500 Sobic001G518500 Sobic005G019100--Sobic001G518500 Sobic001G408400 Sobic001G408400 Sobic005G019100--Sobic001G408400 Sobic003G137600 Sobic003G137600 Sobic005G019100--Sobic003G137600 Sobic005G019100--Sobic007G219500 Sobic003G402600 Sobic003G402600 Sobic010G178800--Sobic003G402600 Sobic009G171100 Sobic009G171100 Sobic010G178800--Sobic009G171100 Sobic001G408100 Sobic001G408100 Sobic010G178800--Sobic001G408100 Sobic004G323600 Sobic004G323600 Sobic010G178800--Sobic004G323600 Sobic010G178800--Sobic005G184200 Sobic010G178800--Sobic009G050000 Sobic004G025300 Sobic004G025300 Sobic010G178800--Sobic004G025300 Sobic001G441000 Sobic001G441000 Sobic010G178800--Sobic001G441000 Sobic003G253500 Sobic003G253500 Sobic010G178800--Sobic003G253500 Sobic008G136800 Sobic008G136800 Sobic007G141100--Sobic008G136800 Sobic007G141100--Sobic001G031800 Sobic007G141100--Sobic007G013900 Sobic003G074900 Sobic003G074900 Sobic007G141100--Sobic003G074900 Sobic009G001900 Sobic009G001900 Sobic007G141100--Sobic009G001900 Sobic007G141100--Sobic002G246800 Sobic004G164000 Sobic004G164000 Sobic007G141100--Sobic004G164000 Sobic007G141100--Sobic002G260200 Sobic007G141100--Sobic004G159000
Octagon: transcription factors


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