Gene annotation
Transcriptome id Sobic.002G428600.1
Synonym Sb02g043860
Functional annotation methyltransferase domain containing protein, expressed
UniProt A0A1W0W842
Pfam PF05050 PF08241
Panther DB PTHR10108 PTHR10108:SF885
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G01710 : methyltransferases
RAP-DB (Rice) LOC_Os07g49210.1 : helicase conserved C-terminal domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049257 , Zm00025a015506
Brachypodium PNT67016 , KQK14504
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G248000 EDR2, putative, expressed -
2 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
3 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
4 Sobic.002G309500 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
5 Sobic.001G110300 fb27, putative, expressed -
6 Sobic.001G451901 - -
7 Sobic.008G047600 expressed protein -
8 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
9 Sobic.004G150200 expressed protein -
10 Sobic.002G422400 adenylate cyclase family protein, expressed -
11 Sobic.009G218000 VIP1 protein, putative, expressed -
12 Sobic.009G187600 methyltransferase domain containing protein, expressed -
13 Sobic.007G019501 - K13448: calcium-binding protein CML
14 Sobic.003G167000 protein phosphotase protein, putative, expressed -
15 Sobic.009G209900 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
16 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
17 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
18 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
19 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
20 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D


Gene co-expression network
sample Sobic002G428600 Sobic002G428600 Sobic010G248000 Sobic010G248000 Sobic002G428600--Sobic010G248000 Sobic009G050000 Sobic009G050000 Sobic002G428600--Sobic009G050000 Sobic010G178800 Sobic010G178800 Sobic002G428600--Sobic010G178800 Sobic002G309500 Sobic002G309500 Sobic002G428600--Sobic002G309500 Sobic001G110300 Sobic001G110300 Sobic002G428600--Sobic001G110300 Sobic001G451901 Sobic001G451901 Sobic002G428600--Sobic001G451901 Sobic008G047600 Sobic008G047600 Sobic002G428600--Sobic008G047600 Sobic004G106700 Sobic004G106700 Sobic002G428600--Sobic004G106700 Sobic004G150200 Sobic004G150200 Sobic002G428600--Sobic004G150200 Sobic004G331900 Sobic004G331900 Sobic010G248000--Sobic004G331900 Sobic010G248000--Sobic002G428600 Sobic008G058200 Sobic008G058200 Sobic010G248000--Sobic008G058200 Sobic003G348200 Sobic003G348200 Sobic010G248000--Sobic003G348200 Sobic003G122400 Sobic003G122400 Sobic010G248000--Sobic003G122400 Sobic009G187600 Sobic009G187600 Sobic010G248000--Sobic009G187600 Sobic003G327600 Sobic003G327600 Sobic010G248000--Sobic003G327600 Sobic010G248000--Sobic010G178800 Sobic010G248000--Sobic001G451901 Sobic009G077100 Sobic009G077100 Sobic009G050000--Sobic009G077100 Sobic010G039000 Sobic010G039000 Sobic009G050000--Sobic010G039000 Sobic003G116600 Sobic003G116600 Sobic009G050000--Sobic003G116600 Sobic004G159000 Sobic004G159000 Sobic009G050000--Sobic004G159000 Sobic003G167000 Sobic003G167000 Sobic009G050000--Sobic003G167000 Sobic002G368400 Sobic002G368400 Sobic009G050000--Sobic002G368400 Sobic005G019100 Sobic005G019100 Sobic009G050000--Sobic005G019100 Sobic009G050000--Sobic010G178800 Sobic007G141100 Sobic007G141100 Sobic009G050000--Sobic007G141100 Sobic003G402600 Sobic003G402600 Sobic010G178800--Sobic003G402600 Sobic009G171100 Sobic009G171100 Sobic010G178800--Sobic009G171100 Sobic001G408100 Sobic001G408100 Sobic010G178800--Sobic001G408100 Sobic004G323600 Sobic004G323600 Sobic010G178800--Sobic004G323600 Sobic005G184200 Sobic005G184200 Sobic010G178800--Sobic005G184200 Sobic010G178800--Sobic009G050000 Sobic004G025300 Sobic004G025300 Sobic010G178800--Sobic004G025300 Sobic001G441000 Sobic001G441000 Sobic010G178800--Sobic001G441000 Sobic003G253500 Sobic003G253500 Sobic010G178800--Sobic003G253500 Sobic006G058900 Sobic006G058900 Sobic002G309500--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic002G309500--Sobic004G202100 Sobic001G050700 Sobic001G050700 Sobic002G309500--Sobic001G050700 Sobic007G159700 Sobic007G159700 Sobic002G309500--Sobic007G159700 Sobic002G395000 Sobic002G395000 Sobic002G309500--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic002G309500--Sobic001G031900 Sobic004G262300 Sobic004G262300 Sobic002G309500--Sobic004G262300 Sobic003G322300 Sobic003G322300 Sobic002G309500--Sobic003G322300 Sobic004G297700 Sobic004G297700 Sobic002G309500--Sobic004G297700 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic003G305100 Sobic003G305100 Sobic001G110300--Sobic003G305100 Sobic004G184000 Sobic004G184000 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G129400 Sobic001G129400 Sobic001G110300--Sobic001G129400 Sobic006G231500 Sobic006G231500 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200 Sobic001G451901--Sobic001G110300 Sobic001G060300 Sobic001G060300 Sobic001G451901--Sobic001G060300 Sobic001G451901--Sobic004G184000 Sobic001G451901--Sobic001G129400 Sobic003G283300 Sobic003G283300 Sobic001G451901--Sobic003G283300 Sobic010G194200 Sobic010G194200 Sobic001G451901--Sobic010G194200 Sobic001G451901--Sobic004G262300 Sobic001G451901--Sobic004G025300 Sobic003G217100 Sobic003G217100 Sobic001G451901--Sobic003G217100 Sobic003G335300 Sobic003G335300 Sobic008G047600--Sobic003G335300 Sobic006G128200 Sobic006G128200 Sobic008G047600--Sobic006G128200 Sobic008G047600--Sobic002G428600 Sobic001G499600 Sobic001G499600 Sobic008G047600--Sobic001G499600 Sobic006G230400 Sobic006G230400 Sobic008G047600--Sobic006G230400 Sobic006G118400 Sobic006G118400 Sobic008G047600--Sobic006G118400 Sobic008G129000 Sobic008G129000 Sobic008G047600--Sobic008G129000 Sobic001G482800 Sobic001G482800 Sobic008G047600--Sobic001G482800 Sobic008G047600--Sobic008G058200 Sobic004G106700--Sobic001G110300 Sobic004G106700--Sobic003G305100 Sobic004G106700--Sobic001G060300 Sobic004G106700--Sobic001G451901 Sobic004G106700--Sobic006G231500 Sobic004G106700--Sobic010G194200 Sobic004G106700--Sobic001G129400 Sobic004G244000 Sobic004G244000 Sobic004G106700--Sobic004G244000 Sobic009G024500 Sobic009G024500 Sobic004G106700--Sobic009G024500 Sobic001G025600 Sobic001G025600 Sobic004G150200--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic004G150200--Sobic003G277000 Sobic009G168000 Sobic009G168000 Sobic004G150200--Sobic009G168000 Sobic005G127100 Sobic005G127100 Sobic004G150200--Sobic005G127100 Sobic004G150200--Sobic001G129400 Sobic004G150200--Sobic002G309500 Sobic004G150200--Sobic003G305100 Sobic008G127500 Sobic008G127500 Sobic004G150200--Sobic008G127500 Sobic007G091000 Sobic007G091000 Sobic004G150200--Sobic007G091000
Octagon: transcription factors


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