Gene annotation
Transcriptome id Sobic.004G106700.1
Synonym Sb04g008710, PEX7, ATPEX7
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt C5XYZ8
Pfam PF00400
Panther DB PTHR22850:SF109 PTHR22850
NCBI CDD KOG0277; Peroxisomal targeting signal type 2 receptor
KEGG Orthology K13341; PEX7, peroxin-7
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G29260 : peroxin 7
RAP-DB (Rice) LOC_Os02g14790.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019994
Brachypodium KQJ94204
Barley HORVU3Hr1G082800.3 , HORVU3Hr1G082800.2 , HORVU3Hr1G082800.1 , HORVU3Hr1G082800.5 , HORVU3Hr1G082800.4
Wheat TraesCS3D02G373900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G110300 fb27, putative, expressed -
2 Sobic.003G305100 expressed protein -
3 Sobic.001G060300 expressed protein -
4 Sobic.001G451901 - -
5 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
6 Sobic.010G194200 expressed protein -
7 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
8 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
9 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
10 Sobic.002G260200 - -
11 Sobic.001G198200 CRP3 - Cysteine-rich family protein precursor, expressed -
12 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
13 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
14 Sobic.003G277000 expressed protein -
15 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
16 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
17 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
18 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
19 Sobic.010G039000 expressed protein -
20 Sobic.002G262200 expressed protein -


Gene co-expression network
sample Sobic004G106700 Sobic004G106700 Sobic001G110300 Sobic001G110300 Sobic004G106700--Sobic001G110300 Sobic003G305100 Sobic003G305100 Sobic004G106700--Sobic003G305100 Sobic001G060300 Sobic001G060300 Sobic004G106700--Sobic001G060300 Sobic001G451901 Sobic001G451901 Sobic004G106700--Sobic001G451901 Sobic006G231500 Sobic006G231500 Sobic004G106700--Sobic006G231500 Sobic010G194200 Sobic010G194200 Sobic004G106700--Sobic010G194200 Sobic001G129400 Sobic001G129400 Sobic004G106700--Sobic001G129400 Sobic004G244000 Sobic004G244000 Sobic004G106700--Sobic004G244000 Sobic009G024500 Sobic009G024500 Sobic004G106700--Sobic009G024500 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic001G110300--Sobic003G305100 Sobic004G184000 Sobic004G184000 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G110300--Sobic001G129400 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic003G305100--Sobic002G260200 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic001G342200 Sobic001G342200 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic004G262300 Sobic004G262300 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic001G451901--Sobic001G110300 Sobic001G451901--Sobic001G060300 Sobic001G451901--Sobic004G184000 Sobic001G451901--Sobic001G129400 Sobic003G283300 Sobic003G283300 Sobic001G451901--Sobic003G283300 Sobic001G451901--Sobic010G194200 Sobic001G451901--Sobic004G262300 Sobic004G025300 Sobic004G025300 Sobic001G451901--Sobic004G025300 Sobic003G217100 Sobic003G217100 Sobic001G451901--Sobic003G217100 Sobic006G231500--Sobic003G305100 Sobic009G212300 Sobic009G212300 Sobic006G231500--Sobic009G212300 Sobic009G001900 Sobic009G001900 Sobic006G231500--Sobic009G001900 Sobic004G202100 Sobic004G202100 Sobic006G231500--Sobic004G202100 Sobic004G012800 Sobic004G012800 Sobic006G231500--Sobic004G012800 Sobic006G109700 Sobic006G109700 Sobic006G231500--Sobic006G109700 Sobic006G231500--Sobic007G091000 Sobic006G231500--Sobic002G296200 Sobic001G286300 Sobic001G286300 Sobic006G231500--Sobic001G286300 Sobic010G194200--Sobic001G129400 Sobic010G194200--Sobic001G060300 Sobic003G326900 Sobic003G326900 Sobic010G194200--Sobic003G326900 Sobic010G194200--Sobic001G451901 Sobic001G473400 Sobic001G473400 Sobic010G194200--Sobic001G473400 Sobic005G132700 Sobic005G132700 Sobic010G194200--Sobic005G132700 Sobic010G194200--Sobic004G106700 Sobic006G153200 Sobic006G153200 Sobic010G194200--Sobic006G153200 Sobic010G194200--Sobic001G110300 Sobic001G129400--Sobic003G326900 Sobic003G003000 Sobic003G003000 Sobic001G129400--Sobic003G003000 Sobic001G129400--Sobic010G194200 Sobic001G008800 Sobic001G008800 Sobic001G129400--Sobic001G008800 Sobic004G248900 Sobic004G248900 Sobic001G129400--Sobic004G248900 Sobic010G018000 Sobic010G018000 Sobic001G129400--Sobic010G018000 Sobic001G129400--Sobic001G451901 Sobic001G129400--Sobic001G060300 Sobic001G129400--Sobic001G473400 Sobic004G297700 Sobic004G297700 Sobic004G244000--Sobic004G297700 Sobic002G186300 Sobic002G186300 Sobic004G244000--Sobic002G186300 Sobic003G034900 Sobic003G034900 Sobic004G244000--Sobic003G034900 Sobic007G171500 Sobic007G171500 Sobic004G244000--Sobic007G171500 Sobic007G119600 Sobic007G119600 Sobic004G244000--Sobic007G119600 Sobic001G458800 Sobic001G458800 Sobic004G244000--Sobic001G458800 Sobic001G457000 Sobic001G457000 Sobic004G244000--Sobic001G457000 Sobic009G224400 Sobic009G224400 Sobic004G244000--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic004G244000--Sobic006G058900 Sobic002G263100 Sobic002G263100 Sobic009G024500--Sobic002G263100 Sobic001G031800 Sobic001G031800 Sobic009G024500--Sobic001G031800 Sobic003G296800 Sobic003G296800 Sobic009G024500--Sobic003G296800 Sobic009G024500--Sobic003G305100 Sobic004G260200 Sobic004G260200 Sobic009G024500--Sobic004G260200 Sobic009G077100 Sobic009G077100 Sobic009G024500--Sobic009G077100 Sobic002G309700 Sobic002G309700 Sobic009G024500--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic009G024500--Sobic001G047800 Sobic004G060500 Sobic004G060500 Sobic009G024500--Sobic004G060500
Octagon: transcription factors


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