Gene annotation
Transcriptome id Sobic.009G024500.1
Synonym Sb09g002070
Functional annotation 50S ribosomal protein L10, chloroplast precursor, putative, expressed
UniProt C5YZ20
Pfam PF00466
Panther DB PTHR11560 PTHR11560:SF9
NCBI CDD -
KEGG Orthology K02864; RP-L10, MRPL10, large subunit ribosomal protein L10
Gene Ontology GO:0005622; intracellular


Orthologs (automatic annotation)
TAIR AT5G13510 : Ribosomal protein L10 family protein
RAP-DB (Rice) LOC_Os05g03030.1 : 50S ribosomal protein L10, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a038206
Brachypodium KQK07781
Barley HORVU1Hr1G011780.2 , HORVU1Hr1G011780.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G024500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
2 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
3 Sobic.003G296800 expressed protein -
4 Sobic.003G305100 expressed protein -
5 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
6 Sobic.009G077100 expressed protein -
7 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
8 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
9 Sobic.004G060500 fiber protein Fb15, putative, expressed -
10 Sobic.003G277000 expressed protein -
11 Sobic.004G183200 expressed protein -
12 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
13 Sobic.007G134900 expressed protein -
14 Sobic.006G262300 expressed protein -
15 Sobic.010G031000 expressed protein -
16 Sobic.006G083500 SLL1 protein, putative, expressed -
17 Sobic.002G296200 expressed protein -
18 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
19 Sobic.001G286300 - -
20 Sobic.007G184001 - K06688: UBE2C, ubiquitin-conjugating enzyme E2 C


Gene co-expression network
sample Sobic009G024500 Sobic009G024500 Sobic002G263100 Sobic002G263100 Sobic009G024500--Sobic002G263100 Sobic001G031800 Sobic001G031800 Sobic009G024500--Sobic001G031800 Sobic003G296800 Sobic003G296800 Sobic009G024500--Sobic003G296800 Sobic003G305100 Sobic003G305100 Sobic009G024500--Sobic003G305100 Sobic004G260200 Sobic004G260200 Sobic009G024500--Sobic004G260200 Sobic009G077100 Sobic009G077100 Sobic009G024500--Sobic009G077100 Sobic002G309700 Sobic002G309700 Sobic009G024500--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic009G024500--Sobic001G047800 Sobic004G060500 Sobic004G060500 Sobic009G024500--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic001G519000 Sobic001G519000 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic002G263100--Sobic003G296800 Sobic003G215700 Sobic003G215700 Sobic002G263100--Sobic003G215700 Sobic001G286200 Sobic001G286200 Sobic002G263100--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G263100--Sobic001G404800 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic001G031800--Sobic002G263100 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic007G013900 Sobic007G013900 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic008G136800 Sobic008G136800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic003G296800--Sobic001G047800 Sobic003G296800--Sobic003G215700 Sobic003G296800--Sobic002G263100 Sobic002G296200 Sobic002G296200 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic003G296800--Sobic004G060500 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic002G356400 Sobic002G356400 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic001G074700 Sobic001G074700 Sobic004G260200--Sobic001G074700 Sobic009G077100--Sobic001G031800 Sobic009G077100--Sobic009G024500 Sobic009G050000 Sobic009G050000 Sobic009G077100--Sobic009G050000 Sobic007G141100 Sobic007G141100 Sobic009G077100--Sobic007G141100 Sobic001G148700 Sobic001G148700 Sobic009G077100--Sobic001G148700 Sobic009G077100--Sobic002G246800 Sobic001G067601 Sobic001G067601 Sobic009G077100--Sobic001G067601 Sobic009G077100--Sobic003G305100 Sobic001G100400 Sobic001G100400 Sobic009G077100--Sobic001G100400 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic004G060500--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic004G060500--Sobic009G176000 Sobic004G060500--Sobic001G519000 Sobic004G060500--Sobic001G047800 Sobic006G083500 Sobic006G083500 Sobic004G060500--Sobic006G083500 Sobic004G060500--Sobic002G418400 Sobic004G060500--Sobic002G309700 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300
Octagon: transcription factors


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