Gene annotation
Transcriptome id Sobic.006G262300.1
Synonym Sb06g032510
Functional annotation expressed protein
UniProt C5YA54
Pfam -
Panther DB PTHR33156 PTHR33156:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39300 : -
RAP-DB (Rice) LOC_Os01g37090.1 : expressed protein
MaizeGDB (Corn) Zm00025a057354 , Zm00025a057353 , Zm00025a009358
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G261900 expressed protein -
2 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
3 Sobic.001G432000 LYR motif containing protein, putative, expressed -
4 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
5 Sobic.003G296800 expressed protein -
6 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
7 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
8 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
9 Sobic.001G533500 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
10 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
11 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
12 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
13 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
14 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
15 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
16 Sobic.006G083500 SLL1 protein, putative, expressed -
17 Sobic.001G030300 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10
18 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
19 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
20 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b


Gene co-expression network
sample Sobic006G262300 Sobic006G262300 Sobic006G261900 Sobic006G261900 Sobic006G262300--Sobic006G261900 Sobic002G375100 Sobic002G375100 Sobic006G262300--Sobic002G375100 Sobic001G432000 Sobic001G432000 Sobic006G262300--Sobic001G432000 Sobic010G251600 Sobic010G251600 Sobic006G262300--Sobic010G251600 Sobic003G296800 Sobic003G296800 Sobic006G262300--Sobic003G296800 Sobic002G081600 Sobic002G081600 Sobic006G262300--Sobic002G081600 Sobic006G116700 Sobic006G116700 Sobic006G262300--Sobic006G116700 Sobic003G436700 Sobic003G436700 Sobic006G262300--Sobic003G436700 Sobic001G533500 Sobic001G533500 Sobic006G262300--Sobic001G533500 Sobic006G261900--Sobic006G262300 Sobic006G261900--Sobic003G436700 Sobic002G379500 Sobic002G379500 Sobic006G261900--Sobic002G379500 Sobic003G109600 Sobic003G109600 Sobic006G261900--Sobic003G109600 Sobic006G261900--Sobic010G251600 Sobic006G213000 Sobic006G213000 Sobic006G261900--Sobic006G213000 Sobic006G261900--Sobic002G081600 Sobic009G173500 Sobic009G173500 Sobic006G261900--Sobic009G173500 Sobic001G016500 Sobic001G016500 Sobic006G261900--Sobic001G016500 Sobic001G018900 Sobic001G018900 Sobic002G375100--Sobic001G018900 Sobic002G375100--Sobic006G116700 Sobic001G374700 Sobic001G374700 Sobic002G375100--Sobic001G374700 Sobic003G408100 Sobic003G408100 Sobic002G375100--Sobic003G408100 Sobic001G036900 Sobic001G036900 Sobic002G375100--Sobic001G036900 Sobic009G215200 Sobic009G215200 Sobic002G375100--Sobic009G215200 Sobic001G016400 Sobic001G016400 Sobic002G375100--Sobic001G016400 Sobic007G197800 Sobic007G197800 Sobic002G375100--Sobic007G197800 Sobic009G050300 Sobic009G050300 Sobic002G375100--Sobic009G050300 Sobic001G432000--Sobic010G251600 Sobic005G168100 Sobic005G168100 Sobic001G432000--Sobic005G168100 Sobic001G304400 Sobic001G304400 Sobic001G432000--Sobic001G304400 Sobic009G232900 Sobic009G232900 Sobic001G432000--Sobic009G232900 Sobic007G019400 Sobic007G019400 Sobic001G432000--Sobic007G019400 Sobic003G150000 Sobic003G150000 Sobic001G432000--Sobic003G150000 Sobic001G054900 Sobic001G054900 Sobic001G432000--Sobic001G054900 Sobic010G206200 Sobic010G206200 Sobic001G432000--Sobic010G206200 Sobic006G156000 Sobic006G156000 Sobic001G432000--Sobic006G156000 Sobic010G251600--Sobic010G206200 Sobic010G251600--Sobic007G019400 Sobic010G251600--Sobic003G436700 Sobic007G178600 Sobic007G178600 Sobic010G251600--Sobic007G178600 Sobic010G251600--Sobic009G215200 Sobic010G251600--Sobic006G116700 Sobic003G078200 Sobic003G078200 Sobic010G251600--Sobic003G078200 Sobic010G251600--Sobic001G054900 Sobic004G331400 Sobic004G331400 Sobic010G251600--Sobic004G331400 Sobic001G047800 Sobic001G047800 Sobic003G296800--Sobic001G047800 Sobic003G215700 Sobic003G215700 Sobic003G296800--Sobic003G215700 Sobic002G263100 Sobic002G263100 Sobic003G296800--Sobic002G263100 Sobic002G296200 Sobic002G296200 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic001G404800 Sobic001G404800 Sobic003G296800--Sobic001G404800 Sobic003G296800--Sobic006G262300 Sobic002G309700 Sobic002G309700 Sobic003G296800--Sobic002G309700 Sobic004G060500 Sobic004G060500 Sobic003G296800--Sobic004G060500 Sobic002G081600--Sobic009G050300 Sobic002G081600--Sobic006G116700 Sobic003G346600 Sobic003G346600 Sobic002G081600--Sobic003G346600 Sobic002G081600--Sobic009G215200 Sobic002G081600--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic002G081600--Sobic002G200600 Sobic006G067800 Sobic006G067800 Sobic002G081600--Sobic006G067800 Sobic009G166500 Sobic009G166500 Sobic002G081600--Sobic009G166500 Sobic001G403500 Sobic001G403500 Sobic002G081600--Sobic001G403500 Sobic006G116700--Sobic009G050300 Sobic006G116700--Sobic007G197800 Sobic006G116700--Sobic009G215200 Sobic006G116700--Sobic001G018900 Sobic006G116700--Sobic002G081600 Sobic004G008400 Sobic004G008400 Sobic006G116700--Sobic004G008400 Sobic001G130301 Sobic001G130301 Sobic006G116700--Sobic001G130301 Sobic006G116700--Sobic002G200600 Sobic006G116700--Sobic001G036900 Sobic003G436700--Sobic004G008400 Sobic003G436700--Sobic006G116700 Sobic003G436700--Sobic009G050300 Sobic003G436700--Sobic010G251600 Sobic003G436700--Sobic006G067800 Sobic003G436700--Sobic007G178600 Sobic003G436700--Sobic002G081600 Sobic003G436700--Sobic009G215200 Sobic003G436700--Sobic002G379500 Sobic007G019000 Sobic007G019000 Sobic001G533500--Sobic007G019000 Sobic007G018300 Sobic007G018300 Sobic001G533500--Sobic007G018300 Sobic010G230700 Sobic010G230700 Sobic001G533500--Sobic010G230700 Sobic001G533500--Sobic001G054900 Sobic001G533500--Sobic009G050300 Sobic001G533500--Sobic007G178600 Sobic001G533500--Sobic006G116700 Sobic004G104100 Sobic004G104100 Sobic001G533500--Sobic004G104100 Sobic001G533500--Sobic004G008400
Octagon: transcription factors


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