Gene annotation
Transcriptome id Sobic.001G286300.1,Sobic.001G286300.2
Synonym Sb01g028110
Functional annotation -
UniProt C5WQR2 , C5WQQ7
Pfam -
Panther DB PTHR37387 PTHR37387:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32310 : -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a003505
Brachypodium KQJ97966
Barley HORVU1Hr1G050750.1
Wheat TraesCS1B02G208900 , TraesCS1A02G193900 , TraesCS1D02G197800
Populus -


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cDNA sequences
Sobic.001G286300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G296200 expressed protein -
2 Sobic.008G094600 - -
3 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
4 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
5 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
6 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
7 Sobic.009G001900 expressed protein -
8 Sobic.003G296800 expressed protein -
9 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
10 Sobic.009G120100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
11 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
12 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
13 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
14 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
15 Sobic.002G387300 expressed protein K17435: large subunit ribosomal protein L54
16 Sobic.009G115700 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
17 Sobic.001G181500 expressed protein -
18 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
19 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
20 Sobic.007G134900 expressed protein -


Gene co-expression network
sample Sobic001G286300 Sobic001G286300 Sobic002G296200 Sobic002G296200 Sobic001G286300--Sobic002G296200 Sobic008G094600 Sobic008G094600 Sobic001G286300--Sobic008G094600 Sobic006G013000 Sobic006G013000 Sobic001G286300--Sobic006G013000 Sobic001G128400 Sobic001G128400 Sobic001G286300--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic001G286300--Sobic003G129800 Sobic002G309700 Sobic002G309700 Sobic001G286300--Sobic002G309700 Sobic009G001900 Sobic009G001900 Sobic001G286300--Sobic009G001900 Sobic003G296800 Sobic003G296800 Sobic001G286300--Sobic003G296800 Sobic007G161700 Sobic007G161700 Sobic001G286300--Sobic007G161700 Sobic002G296200--Sobic006G013000 Sobic007G134900 Sobic007G134900 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic002G296200--Sobic003G129800 Sobic008G098800 Sobic008G098800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic001G058900 Sobic001G058900 Sobic008G094600--Sobic001G058900 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G100000 Sobic008G100000 Sobic008G094600--Sobic008G100000 Sobic001G513500 Sobic001G513500 Sobic008G094600--Sobic001G513500 Sobic008G094600--Sobic001G286300 Sobic006G013000--Sobic002G296200 Sobic006G013000--Sobic002G309700 Sobic006G013000--Sobic001G074700 Sobic002G180300 Sobic002G180300 Sobic006G013000--Sobic002G180300 Sobic006G013000--Sobic001G047800 Sobic007G013900 Sobic007G013900 Sobic006G013000--Sobic007G013900 Sobic006G013000--Sobic007G134900 Sobic001G404800 Sobic001G404800 Sobic006G013000--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic006G013000--Sobic009G215300 Sobic005G111100 Sobic005G111100 Sobic001G128400--Sobic005G111100 Sobic001G128400--Sobic003G129800 Sobic010G204500 Sobic010G204500 Sobic001G128400--Sobic010G204500 Sobic006G081100 Sobic006G081100 Sobic001G128400--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic001G128400--Sobic003G249700 Sobic002G049300 Sobic002G049300 Sobic001G128400--Sobic002G049300 Sobic010G054200 Sobic010G054200 Sobic001G128400--Sobic010G054200 Sobic003G280700 Sobic003G280700 Sobic001G128400--Sobic003G280700 Sobic003G109600 Sobic003G109600 Sobic001G128400--Sobic003G109600 Sobic003G129800--Sobic001G128400 Sobic003G129800--Sobic005G111100 Sobic002G304900 Sobic002G304900 Sobic003G129800--Sobic002G304900 Sobic003G129800--Sobic003G249700 Sobic003G129800--Sobic001G058900 Sobic003G129800--Sobic001G513500 Sobic003G129800--Sobic009G223300 Sobic004G066800 Sobic004G066800 Sobic003G129800--Sobic004G066800 Sobic005G050500 Sobic005G050500 Sobic003G129800--Sobic005G050500 Sobic004G260200 Sobic004G260200 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic009G001900--Sobic002G296200 Sobic008G136800 Sobic008G136800 Sobic009G001900--Sobic008G136800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic009G001900--Sobic002G309700 Sobic003G296800--Sobic001G047800 Sobic003G296800--Sobic003G215700 Sobic002G263100 Sobic002G263100 Sobic003G296800--Sobic002G263100 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic004G060500 Sobic004G060500 Sobic003G296800--Sobic004G060500 Sobic007G161700--Sobic002G296200 Sobic007G161700--Sobic003G296800 Sobic007G161700--Sobic001G286200 Sobic007G161700--Sobic002G263100 Sobic009G173500 Sobic009G173500 Sobic007G161700--Sobic009G173500 Sobic007G161700--Sobic007G134900 Sobic007G161700--Sobic006G013000 Sobic007G161700--Sobic001G047800 Sobic002G308300 Sobic002G308300 Sobic007G161700--Sobic002G308300
Octagon: transcription factors


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