Gene annotation
Transcriptome id Sobic.002G260200.2,Sobic.002G260200.1
Synonym Sb02g029510
Functional annotation -
UniProt A0A1W0W5W8 , C5X5A6
Pfam -
Panther DB PTHR31568
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g35250.1 : vacuolar protein-sorting protein bro1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
2 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
3 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
4 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
5 Sobic.002G296200 expressed protein -
6 Sobic.002G262200 expressed protein -
7 Sobic.003G305100 expressed protein -
8 Sobic.009G001900 expressed protein -
9 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
11 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
12 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
13 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
14 Sobic.001G134200 expressed protein -
15 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
16 Sobic.009G215300 fiber protein Fb11, putative, expressed -
17 Sobic.007G019501 - K13448: calcium-binding protein CML
18 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
19 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
20 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)


Gene co-expression network
sample Sobic002G260200 Sobic002G260200 Sobic007G013900 Sobic007G013900 Sobic002G260200--Sobic007G013900 Sobic006G013000 Sobic006G013000 Sobic002G260200--Sobic006G013000 Sobic001G031800 Sobic001G031800 Sobic002G260200--Sobic001G031800 Sobic004G159000 Sobic004G159000 Sobic002G260200--Sobic004G159000 Sobic002G296200 Sobic002G296200 Sobic002G260200--Sobic002G296200 Sobic002G262200 Sobic002G262200 Sobic002G260200--Sobic002G262200 Sobic003G305100 Sobic003G305100 Sobic002G260200--Sobic003G305100 Sobic009G001900 Sobic009G001900 Sobic002G260200--Sobic009G001900 Sobic004G260200 Sobic004G260200 Sobic002G260200--Sobic004G260200 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic007G013900--Sobic004G159000 Sobic007G013900--Sobic002G260200 Sobic007G013900--Sobic006G013000 Sobic002G309700 Sobic002G309700 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800 Sobic006G013000--Sobic002G296200 Sobic006G013000--Sobic002G309700 Sobic001G074700 Sobic001G074700 Sobic006G013000--Sobic001G074700 Sobic002G180300 Sobic002G180300 Sobic006G013000--Sobic002G180300 Sobic001G047800 Sobic001G047800 Sobic006G013000--Sobic001G047800 Sobic006G013000--Sobic007G013900 Sobic007G134900 Sobic007G134900 Sobic006G013000--Sobic007G134900 Sobic001G404800 Sobic001G404800 Sobic006G013000--Sobic001G404800 Sobic006G013000--Sobic009G215300 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic002G262200--Sobic004G159000 Sobic009G224400 Sobic009G224400 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic001G073600 Sobic001G073600 Sobic002G262200--Sobic001G073600 Sobic001G112400 Sobic001G112400 Sobic002G262200--Sobic001G112400 Sobic002G262200--Sobic007G013900 Sobic009G191400 Sobic009G191400 Sobic002G262200--Sobic009G191400 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic003G305100--Sobic002G260200 Sobic009G024500 Sobic009G024500 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic009G001900--Sobic002G309700 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic002G356400 Sobic002G356400 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700
Octagon: transcription factors


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