Gene annotation
Transcriptome id Sobic.001G134200.1,Sobic.001G134200.2
Synonym Sb01g011720
Functional annotation expressed protein
UniProt C5WPJ9
Pfam -
Panther DB PTHR37709
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67350 : -
RAP-DB (Rice) LOC_Os03g48110.1 : expressed protein
MaizeGDB (Corn) Zm00025a007623
Brachypodium KQK13746 , KQK13745
Barley HORVU2Hr1G033130.2 , HORVU2Hr1G033130.3 , HORVU2Hr1G033130.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G134200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
2 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
3 Sobic.002G260200 - -
4 Sobic.004G183200 expressed protein -
5 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
6 Sobic.003G296800 expressed protein -
7 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
8 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
9 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
10 Sobic.003G305100 expressed protein -
11 Sobic.002G296200 expressed protein -
12 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
13 Sobic.007G134900 expressed protein -
14 Sobic.007G184001 - K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
15 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
16 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
17 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
18 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
19 Sobic.007G019501 - K13448: calcium-binding protein CML
20 Sobic.009G068000 late embryogenesis abundant protein, putative, expressed -


Gene co-expression network
sample Sobic001G134200 Sobic001G134200 Sobic001G031800 Sobic001G031800 Sobic001G134200--Sobic001G031800 Sobic007G013900 Sobic007G013900 Sobic001G134200--Sobic007G013900 Sobic002G260200 Sobic002G260200 Sobic001G134200--Sobic002G260200 Sobic004G183200 Sobic004G183200 Sobic001G134200--Sobic004G183200 Sobic001G148700 Sobic001G148700 Sobic001G134200--Sobic001G148700 Sobic003G296800 Sobic003G296800 Sobic001G134200--Sobic003G296800 Sobic002G263100 Sobic002G263100 Sobic001G134200--Sobic002G263100 Sobic002G309700 Sobic002G309700 Sobic001G134200--Sobic002G309700 Sobic004G159000 Sobic004G159000 Sobic001G134200--Sobic004G159000 Sobic001G031800--Sobic001G134200 Sobic001G031800--Sobic002G263100 Sobic001G031800--Sobic003G296800 Sobic004G260200 Sobic004G260200 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic008G136800 Sobic008G136800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic007G013900--Sobic004G159000 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800 Sobic002G260200--Sobic007G013900 Sobic002G260200--Sobic006G013000 Sobic002G260200--Sobic001G031800 Sobic002G260200--Sobic004G159000 Sobic002G296200 Sobic002G296200 Sobic002G260200--Sobic002G296200 Sobic002G262200 Sobic002G262200 Sobic002G260200--Sobic002G262200 Sobic003G305100 Sobic003G305100 Sobic002G260200--Sobic003G305100 Sobic009G001900 Sobic009G001900 Sobic002G260200--Sobic009G001900 Sobic002G260200--Sobic004G260200 Sobic004G183200--Sobic003G296800 Sobic001G519000 Sobic001G519000 Sobic004G183200--Sobic001G519000 Sobic010G059300 Sobic010G059300 Sobic004G183200--Sobic010G059300 Sobic007G211500 Sobic007G211500 Sobic004G183200--Sobic007G211500 Sobic004G183200--Sobic002G263100 Sobic001G047800 Sobic001G047800 Sobic004G183200--Sobic001G047800 Sobic007G161700 Sobic007G161700 Sobic004G183200--Sobic007G161700 Sobic001G286200 Sobic001G286200 Sobic004G183200--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic004G183200--Sobic004G060500 Sobic004G063500 Sobic004G063500 Sobic001G148700--Sobic004G063500 Sobic001G441000 Sobic001G441000 Sobic001G148700--Sobic001G441000 Sobic010G262300 Sobic010G262300 Sobic001G148700--Sobic010G262300 Sobic001G148700--Sobic001G134200 Sobic009G149800 Sobic009G149800 Sobic001G148700--Sobic009G149800 Sobic001G067601 Sobic001G067601 Sobic001G148700--Sobic001G067601 Sobic004G259600 Sobic004G259600 Sobic001G148700--Sobic004G259600 Sobic001G148700--Sobic007G161700 Sobic001G148700--Sobic001G031800 Sobic003G296800--Sobic001G047800 Sobic003G215700 Sobic003G215700 Sobic003G296800--Sobic003G215700 Sobic003G296800--Sobic002G263100 Sobic003G296800--Sobic002G296200 Sobic003G296800--Sobic004G183200 Sobic001G404800 Sobic001G404800 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic003G296800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic002G263100--Sobic003G296800 Sobic002G263100--Sobic003G215700 Sobic002G263100--Sobic001G286200 Sobic002G263100--Sobic001G404800 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400
Octagon: transcription factors


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