Gene annotation
Transcriptome id Sobic.009G068000.2,Sobic.009G068000.3,Sobic.009G068000.4
Synonym Sb09g005620
Functional annotation late embryogenesis abundant protein, putative, expressed
UniProt C5YU74
Pfam -
Panther DB PTHR35706
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71730 : -
RAP-DB (Rice) LOC_Os05g08920.1 : late embryogenesis abundant protein, putative, expressed
MaizeGDB (Corn) Zm00025a037045
Brachypodium KQK07184
Barley HORVU1Hr1G027490.4 , HORVU1Hr1G027490.3 , HORVU1Hr1G027490.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
2 Sobic.002G296200 expressed protein -
3 Sobic.004G060500 fiber protein Fb15, putative, expressed -
4 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
5 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
6 Sobic.008G088600 expressed protein -
7 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
8 Sobic.003G141700 50S ribosomal protein L15, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
9 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
10 Sobic.001G134200 expressed protein -
11 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
12 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
13 Sobic.002G308300 expressed protein -
14 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
15 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
16 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
17 Sobic.007G134900 expressed protein -
18 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
19 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
20 Sobic.001G441000 erwinia induced protein 2, putative, expressed -


Gene co-expression network
sample Sobic009G068000 Sobic009G068000 Sobic007G161700 Sobic007G161700 Sobic009G068000--Sobic007G161700 Sobic002G296200 Sobic002G296200 Sobic009G068000--Sobic002G296200 Sobic004G060500 Sobic004G060500 Sobic009G068000--Sobic004G060500 Sobic010G059300 Sobic010G059300 Sobic009G068000--Sobic010G059300 Sobic001G047800 Sobic001G047800 Sobic009G068000--Sobic001G047800 Sobic008G088600 Sobic008G088600 Sobic009G068000--Sobic008G088600 Sobic002G309700 Sobic002G309700 Sobic009G068000--Sobic002G309700 Sobic003G141700 Sobic003G141700 Sobic009G068000--Sobic003G141700 Sobic007G013900 Sobic007G013900 Sobic009G068000--Sobic007G013900 Sobic007G161700--Sobic002G296200 Sobic003G296800 Sobic003G296800 Sobic007G161700--Sobic003G296800 Sobic001G286200 Sobic001G286200 Sobic007G161700--Sobic001G286200 Sobic002G263100 Sobic002G263100 Sobic007G161700--Sobic002G263100 Sobic009G173500 Sobic009G173500 Sobic007G161700--Sobic009G173500 Sobic007G134900 Sobic007G134900 Sobic007G161700--Sobic007G134900 Sobic006G013000 Sobic006G013000 Sobic007G161700--Sobic006G013000 Sobic007G161700--Sobic001G047800 Sobic002G308300 Sobic002G308300 Sobic007G161700--Sobic002G308300 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic002G296200--Sobic001G047800 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic004G060500--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic004G060500--Sobic009G176000 Sobic001G519000 Sobic001G519000 Sobic004G060500--Sobic001G519000 Sobic004G060500--Sobic001G047800 Sobic006G083500 Sobic006G083500 Sobic004G060500--Sobic006G083500 Sobic002G418400 Sobic002G418400 Sobic004G060500--Sobic002G418400 Sobic004G060500--Sobic002G309700 Sobic004G060500--Sobic002G296200 Sobic004G060500--Sobic010G059300 Sobic010G059300--Sobic004G060500 Sobic010G059300--Sobic001G519000 Sobic004G183200 Sobic004G183200 Sobic010G059300--Sobic004G183200 Sobic010G059300--Sobic001G047800 Sobic010G264300 Sobic010G264300 Sobic010G059300--Sobic010G264300 Sobic003G218400 Sobic003G218400 Sobic010G059300--Sobic003G218400 Sobic001G095632 Sobic001G095632 Sobic010G059300--Sobic001G095632 Sobic010G059300--Sobic002G418400 Sobic010G059300--Sobic003G296800 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G404800 Sobic001G404800 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic003G227200 Sobic003G227200 Sobic008G088600--Sobic003G227200 Sobic008G088600--Sobic009G068000 Sobic003G358300 Sobic003G358300 Sobic008G088600--Sobic003G358300 Sobic010G106200 Sobic010G106200 Sobic008G088600--Sobic010G106200 Sobic007G073600 Sobic007G073600 Sobic008G088600--Sobic007G073600 Sobic003G012600 Sobic003G012600 Sobic008G088600--Sobic003G012600 Sobic005G091700 Sobic005G091700 Sobic008G088600--Sobic005G091700 Sobic006G231700 Sobic006G231700 Sobic008G088600--Sobic006G231700 Sobic001G216701 Sobic001G216701 Sobic008G088600--Sobic001G216701 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic001G224400 Sobic001G224400 Sobic003G141700--Sobic001G224400 Sobic001G350600 Sobic001G350600 Sobic003G141700--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic003G141700--Sobic004G170400 Sobic004G339300 Sobic004G339300 Sobic003G141700--Sobic004G339300 Sobic003G141700--Sobic001G074700 Sobic009G119900 Sobic009G119900 Sobic003G141700--Sobic009G119900 Sobic003G185500 Sobic003G185500 Sobic003G141700--Sobic003G185500 Sobic001G342200 Sobic001G342200 Sobic003G141700--Sobic001G342200 Sobic007G114200 Sobic007G114200 Sobic003G141700--Sobic007G114200 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.