Gene annotation
Transcriptome id Sobic.007G019501.1
Synonym -
Functional annotation -
UniProt A0A1Z5R892
Pfam PF13405 PF13499
Panther DB PTHR23050 PTHR23050:SF214
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology GO:0005509; calcium ion binding


Orthologs (automatic annotation)
TAIR AT1G12310 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os08g02420.1 : OsCML7 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a030245 , Zm00025a040293
Brachypodium KQJ94883
Barley HORVU7Hr1G075240.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
2 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
3 Sobic.002G260200 - -
4 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
5 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
6 Sobic.009G001900 expressed protein -
7 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
8 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
9 Sobic.002G254650 - -
10 Sobic.001G134200 expressed protein -
11 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
12 Sobic.010G065400 X0001, putative, expressed -
13 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
14 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
15 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
16 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
17 Sobic.003G217100 Yip1 domain containing protein, expressed -
18 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
19 Sobic.009G077100 expressed protein -
20 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4


Gene co-expression network
sample Sobic007G019501 Sobic007G019501 Sobic004G164000 Sobic004G164000 Sobic007G019501--Sobic004G164000 Sobic004G159000 Sobic004G159000 Sobic007G019501--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G019501--Sobic002G260200 Sobic001G392800 Sobic001G392800 Sobic007G019501--Sobic001G392800 Sobic003G131300 Sobic003G131300 Sobic007G019501--Sobic003G131300 Sobic009G001900 Sobic009G001900 Sobic007G019501--Sobic009G001900 Sobic004G012800 Sobic004G012800 Sobic007G019501--Sobic004G012800 Sobic001G031800 Sobic001G031800 Sobic007G019501--Sobic001G031800 Sobic002G254650 Sobic002G254650 Sobic007G019501--Sobic002G254650 Sobic004G164000--Sobic003G131300 Sobic004G164000--Sobic007G019501 Sobic004G164000--Sobic009G001900 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic008G136800 Sobic008G136800 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic002G260200--Sobic007G013900 Sobic006G013000 Sobic006G013000 Sobic002G260200--Sobic006G013000 Sobic002G260200--Sobic001G031800 Sobic002G260200--Sobic004G159000 Sobic002G296200 Sobic002G296200 Sobic002G260200--Sobic002G296200 Sobic002G260200--Sobic002G262200 Sobic003G305100 Sobic003G305100 Sobic002G260200--Sobic003G305100 Sobic002G260200--Sobic009G001900 Sobic004G260200 Sobic004G260200 Sobic002G260200--Sobic004G260200 Sobic001G392800--Sobic002G262200 Sobic003G217100 Sobic003G217100 Sobic001G392800--Sobic003G217100 Sobic001G392800--Sobic002G090700 Sobic001G035400 Sobic001G035400 Sobic001G392800--Sobic001G035400 Sobic001G392800--Sobic004G159000 Sobic001G392800--Sobic004G344800 Sobic001G392800--Sobic009G001900 Sobic009G112900 Sobic009G112900 Sobic001G392800--Sobic009G112900 Sobic004G066800 Sobic004G066800 Sobic001G392800--Sobic004G066800 Sobic003G131300--Sobic004G164000 Sobic010G197900 Sobic010G197900 Sobic003G131300--Sobic010G197900 Sobic006G094600 Sobic006G094600 Sobic003G131300--Sobic006G094600 Sobic001G126200 Sobic001G126200 Sobic003G131300--Sobic001G126200 Sobic003G131300--Sobic001G035400 Sobic003G131300--Sobic004G344800 Sobic001G036700 Sobic001G036700 Sobic003G131300--Sobic001G036700 Sobic003G131300--Sobic009G001900 Sobic003G131300--Sobic007G019501 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic004G137900 Sobic004G137900 Sobic004G012800--Sobic004G137900 Sobic004G012800--Sobic006G231500 Sobic006G231700 Sobic006G231700 Sobic004G012800--Sobic006G231700 Sobic004G012800--Sobic009G001900 Sobic004G012800--Sobic002G254650 Sobic005G111100 Sobic005G111100 Sobic004G012800--Sobic005G111100 Sobic003G358300 Sobic003G358300 Sobic004G012800--Sobic003G358300 Sobic004G012800--Sobic006G094600 Sobic001G532100 Sobic001G532100 Sobic004G012800--Sobic001G532100 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic004G352900 Sobic004G352900 Sobic002G254650--Sobic004G352900 Sobic008G132800 Sobic008G132800 Sobic002G254650--Sobic008G132800 Sobic010G065400 Sobic010G065400 Sobic002G254650--Sobic010G065400 Sobic002G254650--Sobic004G012800 Sobic010G054200 Sobic010G054200 Sobic002G254650--Sobic010G054200 Sobic010G029400 Sobic010G029400 Sobic002G254650--Sobic010G029400 Sobic005G157200 Sobic005G157200 Sobic002G254650--Sobic005G157200 Sobic010G099200 Sobic010G099200 Sobic002G254650--Sobic010G099200 Sobic006G052400 Sobic006G052400 Sobic002G254650--Sobic006G052400
Octagon: transcription factors


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