Gene annotation
Transcriptome id Sobic.004G164000.1
Synonym Sb04g021570
Functional annotation glycosyltransferase, putative, expressed
UniProt C5XTD8
Pfam PF05637
Panther DB PTHR31311 PTHR31311:SF4
NCBI CDD KOG4748; Subunit of Golgi mannosyltransferase complex
KEGG Orthology K08238; xyloglucan 6-xylosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G07720 : Galactosyl transferase GMA12/MNN10 family protein
RAP-DB (Rice) LOC_Os02g32750.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a002061 , Zm00025a020529
Brachypodium PNT77555 , PNT68748 , PNT68750 , PNT68751 , PNT68752 , PNT68753 , KQJ99710 , KQK22069 , PNT68749 , KQJ99709 , KQJ99708
Barley HORVU6Hr1G040960.2 , HORVU6Hr1G040960.1 , HORVU5Hr1G042000.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G164000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
2 Sobic.007G019501 - K13448: calcium-binding protein CML
3 Sobic.009G001900 expressed protein -
4 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
5 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
6 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
7 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
8 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
9 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
10 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
11 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
12 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
13 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
14 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
15 Sobic.010G197900 expressed protein -
16 Sobic.010G065400 X0001, putative, expressed -
17 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
18 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
19 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
20 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9


Gene co-expression network
sample Sobic004G164000 Sobic004G164000 Sobic003G131300 Sobic003G131300 Sobic004G164000--Sobic003G131300 Sobic007G019501 Sobic007G019501 Sobic004G164000--Sobic007G019501 Sobic009G001900 Sobic009G001900 Sobic004G164000--Sobic009G001900 Sobic004G159000 Sobic004G159000 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic001G392800 Sobic001G392800 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic008G136800 Sobic008G136800 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic003G131300--Sobic004G164000 Sobic010G197900 Sobic010G197900 Sobic003G131300--Sobic010G197900 Sobic006G094600 Sobic006G094600 Sobic003G131300--Sobic006G094600 Sobic001G126200 Sobic001G126200 Sobic003G131300--Sobic001G126200 Sobic001G035400 Sobic001G035400 Sobic003G131300--Sobic001G035400 Sobic004G344800 Sobic004G344800 Sobic003G131300--Sobic004G344800 Sobic001G036700 Sobic001G036700 Sobic003G131300--Sobic001G036700 Sobic003G131300--Sobic009G001900 Sobic003G131300--Sobic007G019501 Sobic007G019501--Sobic004G164000 Sobic007G019501--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G019501--Sobic002G260200 Sobic007G019501--Sobic001G392800 Sobic007G019501--Sobic003G131300 Sobic007G019501--Sobic009G001900 Sobic004G012800 Sobic004G012800 Sobic007G019501--Sobic004G012800 Sobic001G031800 Sobic001G031800 Sobic007G019501--Sobic001G031800 Sobic002G254650 Sobic002G254650 Sobic007G019501--Sobic002G254650 Sobic002G296200 Sobic002G296200 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G159000--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic003G116600 Sobic003G116600 Sobic002G090700--Sobic003G116600 Sobic002G090700--Sobic010G007400 Sobic003G217100 Sobic003G217100 Sobic002G090700--Sobic003G217100 Sobic002G090700--Sobic004G159000 Sobic002G090700--Sobic003G152900 Sobic002G090700--Sobic004G066800 Sobic002G090700--Sobic001G309500 Sobic002G078400 Sobic002G078400 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic001G392800--Sobic002G262200 Sobic001G392800--Sobic003G217100 Sobic001G392800--Sobic002G090700 Sobic001G392800--Sobic001G035400 Sobic001G392800--Sobic004G159000 Sobic001G392800--Sobic004G344800 Sobic001G392800--Sobic009G001900 Sobic009G112900 Sobic009G112900 Sobic001G392800--Sobic009G112900 Sobic001G392800--Sobic004G066800 Sobic004G196300 Sobic004G196300 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic001G309500--Sobic002G078400 Sobic001G309500--Sobic003G217100 Sobic001G526100 Sobic001G526100 Sobic001G309500--Sobic001G526100 Sobic001G309500--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic001G309500--Sobic008G132800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic009G211900 Sobic009G211900 Sobic008G136800--Sobic009G211900 Sobic008G136800--Sobic007G013900 Sobic008G136800--Sobic001G031800 Sobic006G124300 Sobic006G124300 Sobic008G136800--Sobic006G124300 Sobic007G141100 Sobic007G141100 Sobic008G136800--Sobic007G141100 Sobic008G136800--Sobic002G296200 Sobic003G074900 Sobic003G074900 Sobic008G136800--Sobic003G074900 Sobic008G025700--Sobic004G164000 Sobic008G084100 Sobic008G084100 Sobic008G025700--Sobic008G084100 Sobic008G025700--Sobic003G074900 Sobic005G079500 Sobic005G079500 Sobic008G025700--Sobic005G079500 Sobic008G025700--Sobic009G001900 Sobic002G387800 Sobic002G387800 Sobic008G025700--Sobic002G387800 Sobic008G025700--Sobic001G035400 Sobic004G294900 Sobic004G294900 Sobic008G025700--Sobic004G294900 Sobic001G013200 Sobic001G013200 Sobic008G025700--Sobic001G013200
Octagon: transcription factors


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