Gene annotation
Transcriptome id Sobic.003G348200.1
Synonym Sb03g039120
Functional annotation Lung seven transmembrane receptor domain containing protein, putative, expressed
UniProt C5XP25
Pfam PF06814
Panther DB PTHR21229 PTHR21229:SF26
NCBI CDD KOG2569; G protein-coupled seven transmembrane receptor
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G18520 : Lung seven transmembrane receptor family protein
RAP-DB (Rice) LOC_Os01g61970.1 : Lung seven transmembrane receptor domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a026952 , Zm00025a039704
Brachypodium KQK10475 , KQK05863
Barley HORVU0Hr1G007110.1 , HORVU0Hr1G007110.3 , HORVU0Hr1G007110.2 , HORVU1Hr1G071810.4 , HORVU1Hr1G071810.5 , HORVU1Hr1G071810.1 , HORVU1Hr1G071810.2 , HORVU1Hr1G071810.3 , HORVU3Hr1G087110.4 , HORVU3Hr1G087110.2 , HORVU3Hr1G087110.3 , HORVU3Hr1G087110.1
Wheat TraesCS3D02G348500
Populus -


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cDNA sequences
Sobic.003G348200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331900 transmembrane 9 superfamily member, putative, expressed -
2 Sobic.004G184000 SFT2, putative, expressed -
3 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
4 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
5 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
6 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
7 Sobic.009G187600 methyltransferase domain containing protein, expressed -
8 Sobic.003G424300 Pyrroline-5-carboxylate reductase(PubMedID : 24906815)@pyrroline-5-carboxylate reductase, putative, expressed K00286: pyrroline-5-carboxylate reductase
9 Sobic.004G358900 Sec1 family transport protein, putative, expressed -
10 Sobic.003G327600 domain of unknown function, DUF250 domain containing protein, expressed -
11 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
12 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
13 Sobic.001G026600 - -
14 Sobic.001G451901 - -
15 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
16 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
17 Sobic.004G153000 expressed protein -
18 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
19 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
20 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2


Gene co-expression network
sample Sobic003G348200 Sobic003G348200 Sobic004G331900 Sobic004G331900 Sobic003G348200--Sobic004G331900 Sobic004G184000 Sobic004G184000 Sobic003G348200--Sobic004G184000 Sobic001G196100 Sobic001G196100 Sobic003G348200--Sobic001G196100 Sobic010G277000 Sobic010G277000 Sobic003G348200--Sobic010G277000 Sobic001G542900 Sobic001G542900 Sobic003G348200--Sobic001G542900 Sobic001G116000 Sobic001G116000 Sobic003G348200--Sobic001G116000 Sobic009G187600 Sobic009G187600 Sobic003G348200--Sobic009G187600 Sobic003G424300 Sobic003G424300 Sobic003G348200--Sobic003G424300 Sobic004G358900 Sobic004G358900 Sobic003G348200--Sobic004G358900 Sobic004G331900--Sobic003G348200 Sobic003G327600 Sobic003G327600 Sobic004G331900--Sobic003G327600 Sobic004G331900--Sobic003G424300 Sobic001G436100 Sobic001G436100 Sobic004G331900--Sobic001G436100 Sobic010G248000 Sobic010G248000 Sobic004G331900--Sobic010G248000 Sobic004G151200 Sobic004G151200 Sobic004G331900--Sobic004G151200 Sobic004G331900--Sobic004G358900 Sobic004G331900--Sobic001G116000 Sobic004G331900--Sobic004G184000 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic004G184000--Sobic001G116000 Sobic001G196100--Sobic001G116000 Sobic007G044400 Sobic007G044400 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G035400 Sobic001G035400 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic002G087000 Sobic002G087000 Sobic001G196100--Sobic002G087000 Sobic003G319000 Sobic003G319000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic008G084100 Sobic008G084100 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic001G542900--Sobic007G217400 Sobic002G423800 Sobic002G423800 Sobic001G542900--Sobic002G423800 Sobic004G335000 Sobic004G335000 Sobic001G542900--Sobic004G335000 Sobic008G110500 Sobic008G110500 Sobic001G542900--Sobic008G110500 Sobic003G043400 Sobic003G043400 Sobic001G542900--Sobic003G043400 Sobic001G444300 Sobic001G444300 Sobic001G542900--Sobic001G444300 Sobic002G141700 Sobic002G141700 Sobic001G542900--Sobic002G141700 Sobic009G164700 Sobic009G164700 Sobic001G542900--Sobic009G164700 Sobic007G176200 Sobic007G176200 Sobic001G542900--Sobic007G176200 Sobic001G116000--Sobic001G196100 Sobic001G116000--Sobic001G035400 Sobic001G116000--Sobic007G044400 Sobic007G048700 Sobic007G048700 Sobic001G116000--Sobic007G048700 Sobic002G313600 Sobic002G313600 Sobic001G116000--Sobic002G313600 Sobic001G116000--Sobic008G084100 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic001G116000--Sobic004G184000 Sobic006G094500 Sobic006G094500 Sobic009G187600--Sobic006G094500 Sobic009G187600--Sobic003G348200 Sobic010G185100 Sobic010G185100 Sobic009G187600--Sobic010G185100 Sobic009G218000 Sobic009G218000 Sobic009G187600--Sobic009G218000 Sobic007G010200 Sobic007G010200 Sobic009G187600--Sobic007G010200 Sobic001G188700 Sobic001G188700 Sobic009G187600--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic009G187600--Sobic002G422400 Sobic007G031100 Sobic007G031100 Sobic009G187600--Sobic007G031100 Sobic005G044100 Sobic005G044100 Sobic009G187600--Sobic005G044100 Sobic003G424300--Sobic004G331900 Sobic003G424300--Sobic003G348200 Sobic003G424300--Sobic003G327600 Sobic003G312400 Sobic003G312400 Sobic003G424300--Sobic003G312400 Sobic001G061900 Sobic001G061900 Sobic003G424300--Sobic001G061900 Sobic009G194200 Sobic009G194200 Sobic003G424300--Sobic009G194200 Sobic003G353400 Sobic003G353400 Sobic003G424300--Sobic003G353400 Sobic009G182200 Sobic009G182200 Sobic003G424300--Sobic009G182200 Sobic010G186500 Sobic010G186500 Sobic003G424300--Sobic010G186500 Sobic009G120500 Sobic009G120500 Sobic004G358900--Sobic009G120500 Sobic003G005900 Sobic003G005900 Sobic004G358900--Sobic003G005900 Sobic008G125000 Sobic008G125000 Sobic004G358900--Sobic008G125000 Sobic004G358900--Sobic003G348200 Sobic003G062400 Sobic003G062400 Sobic004G358900--Sobic003G062400 Sobic004G277400 Sobic004G277400 Sobic004G358900--Sobic004G277400 Sobic001G205900 Sobic001G205900 Sobic004G358900--Sobic001G205900 Sobic006G265600 Sobic006G265600 Sobic004G358900--Sobic006G265600 Sobic002G223800 Sobic002G223800 Sobic004G358900--Sobic002G223800
Octagon: transcription factors


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