Gene annotation
Transcriptome id Sobic.009G187600.3
Synonym Sb09g024700
Functional annotation methyltransferase domain containing protein, expressed
UniProt A0A1B6P962
Pfam -
Panther DB PTHR10108 PTHR10108:SF914
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16030 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os05g42140.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023568 , Zm00025a054985 , Zm00025a044137
Brachypodium PNT70975 , KQK10109
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G187600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
2 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
3 Sobic.010G185100 RNA polymerase Rpc34 subunit family protein, expressed K03025: RPC6, DNA-directed RNA polymerase III subunit RPC6
4 Sobic.009G218000 VIP1 protein, putative, expressed -
5 Sobic.007G010200 - -
6 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
7 Sobic.002G422400 adenylate cyclase family protein, expressed -
8 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
9 Sobic.005G044100 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.010G248000 EDR2, putative, expressed -
11 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
12 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
13 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
14 Sobic.001G134200 expressed protein -
15 Sobic.001G110300 fb27, putative, expressed -
16 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
17 Sobic.007G224300 RING finger protein, putative, expressed -
18 Sobic.009G232500 expressed protein -
19 Sobic.004G331900 transmembrane 9 superfamily member, putative, expressed -
20 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30


Gene co-expression network
sample Sobic009G187600 Sobic009G187600 Sobic006G094500 Sobic006G094500 Sobic009G187600--Sobic006G094500 Sobic003G348200 Sobic003G348200 Sobic009G187600--Sobic003G348200 Sobic010G185100 Sobic010G185100 Sobic009G187600--Sobic010G185100 Sobic009G218000 Sobic009G218000 Sobic009G187600--Sobic009G218000 Sobic007G010200 Sobic007G010200 Sobic009G187600--Sobic007G010200 Sobic001G188700 Sobic001G188700 Sobic009G187600--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic009G187600--Sobic002G422400 Sobic007G031100 Sobic007G031100 Sobic009G187600--Sobic007G031100 Sobic005G044100 Sobic005G044100 Sobic009G187600--Sobic005G044100 Sobic006G094500--Sobic009G187600 Sobic007G224300 Sobic007G224300 Sobic006G094500--Sobic007G224300 Sobic006G094500--Sobic001G188700 Sobic001G451901 Sobic001G451901 Sobic006G094500--Sobic001G451901 Sobic001G434400 Sobic001G434400 Sobic006G094500--Sobic001G434400 Sobic006G094500--Sobic002G422400 Sobic004G018200 Sobic004G018200 Sobic006G094500--Sobic004G018200 Sobic002G280900 Sobic002G280900 Sobic006G094500--Sobic002G280900 Sobic006G094500--Sobic007G031100 Sobic004G331900 Sobic004G331900 Sobic003G348200--Sobic004G331900 Sobic004G184000 Sobic004G184000 Sobic003G348200--Sobic004G184000 Sobic001G196100 Sobic001G196100 Sobic003G348200--Sobic001G196100 Sobic010G277000 Sobic010G277000 Sobic003G348200--Sobic010G277000 Sobic001G542900 Sobic001G542900 Sobic003G348200--Sobic001G542900 Sobic001G116000 Sobic001G116000 Sobic003G348200--Sobic001G116000 Sobic003G348200--Sobic009G187600 Sobic003G424300 Sobic003G424300 Sobic003G348200--Sobic003G424300 Sobic004G358900 Sobic004G358900 Sobic003G348200--Sobic004G358900 Sobic007G192100 Sobic007G192100 Sobic010G185100--Sobic007G192100 Sobic010G185100--Sobic009G187600 Sobic001G347700 Sobic001G347700 Sobic010G185100--Sobic001G347700 Sobic002G267400 Sobic002G267400 Sobic010G185100--Sobic002G267400 Sobic002G401700 Sobic002G401700 Sobic010G185100--Sobic002G401700 Sobic001G402600 Sobic001G402600 Sobic010G185100--Sobic001G402600 Sobic007G117800 Sobic007G117800 Sobic010G185100--Sobic007G117800 Sobic004G353500 Sobic004G353500 Sobic010G185100--Sobic004G353500 Sobic007G036800 Sobic007G036800 Sobic010G185100--Sobic007G036800 Sobic006G153200 Sobic006G153200 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic003G167000 Sobic003G167000 Sobic009G218000--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic009G218000--Sobic002G217500 Sobic009G218000--Sobic002G422400 Sobic001G352800 Sobic001G352800 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic008G011800 Sobic008G011800 Sobic009G218000--Sobic008G011800 Sobic004G229000 Sobic004G229000 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G010200--Sobic007G031100 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic003G304800 Sobic003G304800 Sobic007G010200--Sobic003G304800 Sobic007G010200--Sobic001G309200 Sobic010G018900 Sobic010G018900 Sobic007G010200--Sobic010G018900 Sobic005G110526 Sobic005G110526 Sobic001G188700--Sobic005G110526 Sobic001G188700--Sobic004G018200 Sobic001G188700--Sobic006G094500 Sobic001G188700--Sobic009G187600 Sobic001G188700--Sobic007G031100 Sobic008G125000 Sobic008G125000 Sobic001G188700--Sobic008G125000 Sobic001G132900 Sobic001G132900 Sobic001G188700--Sobic001G132900 Sobic003G058900 Sobic003G058900 Sobic001G188700--Sobic003G058900 Sobic001G188700--Sobic001G434400 Sobic002G422400--Sobic009G218000 Sobic001G378200 Sobic001G378200 Sobic002G422400--Sobic001G378200 Sobic001G358500 Sobic001G358500 Sobic002G422400--Sobic001G358500 Sobic002G276800 Sobic002G276800 Sobic002G422400--Sobic002G276800 Sobic006G041800 Sobic006G041800 Sobic002G422400--Sobic006G041800 Sobic004G151200 Sobic004G151200 Sobic002G422400--Sobic004G151200 Sobic002G422400--Sobic001G451901 Sobic002G422400--Sobic006G153200 Sobic003G190600 Sobic003G190600 Sobic002G422400--Sobic003G190600 Sobic007G031100--Sobic007G010200 Sobic001G432100 Sobic001G432100 Sobic007G031100--Sobic001G432100 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic007G031100--Sobic001G188700 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic005G044100--Sobic009G187600 Sobic005G044100--Sobic003G410200 Sobic001G478700 Sobic001G478700 Sobic005G044100--Sobic001G478700 Sobic005G044100--Sobic001G434400 Sobic005G044100--Sobic002G280900 Sobic005G044100--Sobic006G094500 Sobic006G131900 Sobic006G131900 Sobic005G044100--Sobic006G131900 Sobic005G044100--Sobic007G224300 Sobic005G084900 Sobic005G084900 Sobic005G044100--Sobic005G084900
Octagon: transcription factors


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