Gene annotation
Transcriptome id Sobic.002G280900.1
Synonym
Functional annotation la domain containing protein, putative, expressed
UniProt C5X6V9
Pfam PF05383
Panther DB PTHR22792 PTHR22792:SF69
NCBI CDD -
KEGG Orthology K18757; la-related protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66100 : winged-helix DNA-binding transcription factor family protein
RAP-DB (Rice) LOC_Os09g36920.1 : la domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049308 , Zm00025a014468
Brachypodium -
Barley -
Wheat TraesCS5D02G338100
Populus -


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cDNA sequences
Sobic.002G280900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
2 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -
3 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
4 Sobic.001G432100 expressed protein -
5 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
6 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
7 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
8 Sobic.001G302900 oxysterol-binding protein, putative, expressed -
9 Sobic.007G140600 stromal cell-derived factor 2-like protein precursor, putative, expressed -
10 Sobic.007G036800 xylosyltransferase, putative, expressed -
11 Sobic.009G239600 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.002G250550 - -
13 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
14 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
15 Sobic.004G145600 expressed protein -
16 Sobic.009G187600 methyltransferase domain containing protein, expressed -
17 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
18 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
19 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
20 Sobic.003G122300 mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41


Gene co-expression network
sample Sobic002G280900 Sobic002G280900 Sobic010G059700 Sobic010G059700 Sobic002G280900--Sobic010G059700 Sobic001G506000 Sobic001G506000 Sobic002G280900--Sobic001G506000 Sobic007G031100 Sobic007G031100 Sobic002G280900--Sobic007G031100 Sobic001G432100 Sobic001G432100 Sobic002G280900--Sobic001G432100 Sobic004G151200 Sobic004G151200 Sobic002G280900--Sobic004G151200 Sobic005G084900 Sobic005G084900 Sobic002G280900--Sobic005G084900 Sobic009G002000 Sobic009G002000 Sobic002G280900--Sobic009G002000 Sobic001G302900 Sobic001G302900 Sobic002G280900--Sobic001G302900 Sobic007G140600 Sobic007G140600 Sobic002G280900--Sobic007G140600 Sobic007G036800 Sobic007G036800 Sobic010G059700--Sobic007G036800 Sobic002G306600 Sobic002G306600 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic003G224300 Sobic003G224300 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic003G148900 Sobic003G148900 Sobic010G059700--Sobic003G148900 Sobic004G145600 Sobic004G145600 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic001G487100 Sobic001G487100 Sobic001G506000--Sobic001G487100 Sobic004G075200 Sobic004G075200 Sobic001G506000--Sobic004G075200 Sobic001G115500 Sobic001G115500 Sobic001G506000--Sobic001G115500 Sobic005G175000 Sobic005G175000 Sobic001G506000--Sobic005G175000 Sobic009G207200 Sobic009G207200 Sobic001G506000--Sobic009G207200 Sobic003G122000 Sobic003G122000 Sobic001G506000--Sobic003G122000 Sobic001G469200 Sobic001G469200 Sobic001G506000--Sobic001G469200 Sobic007G165300 Sobic007G165300 Sobic001G506000--Sobic007G165300 Sobic001G506000--Sobic002G280900 Sobic007G010200 Sobic007G010200 Sobic007G031100--Sobic007G010200 Sobic007G031100--Sobic001G432100 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic001G188700 Sobic001G188700 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic009G218000 Sobic009G218000 Sobic001G432100--Sobic009G218000 Sobic001G432100--Sobic007G010200 Sobic001G432100--Sobic007G031100 Sobic001G432100--Sobic007G036800 Sobic001G432100--Sobic004G145600 Sobic001G432100--Sobic002G280900 Sobic010G018900 Sobic010G018900 Sobic001G432100--Sobic010G018900 Sobic004G229000 Sobic004G229000 Sobic001G432100--Sobic004G229000 Sobic004G354100 Sobic004G354100 Sobic001G432100--Sobic004G354100 Sobic001G455000 Sobic001G455000 Sobic004G151200--Sobic001G455000 Sobic004G277400 Sobic004G277400 Sobic004G151200--Sobic004G277400 Sobic003G130900 Sobic003G130900 Sobic004G151200--Sobic003G130900 Sobic003G397900 Sobic003G397900 Sobic004G151200--Sobic003G397900 Sobic003G005900 Sobic003G005900 Sobic004G151200--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic004G151200--Sobic001G151600 Sobic001G445500 Sobic001G445500 Sobic004G151200--Sobic001G445500 Sobic005G022100 Sobic005G022100 Sobic004G151200--Sobic005G022100 Sobic006G265600 Sobic006G265600 Sobic004G151200--Sobic006G265600 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic006G164000 Sobic006G164000 Sobic005G084900--Sobic006G164000 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic005G084900--Sobic010G059700 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic002G277200 Sobic002G277200 Sobic009G002000--Sobic002G277200 Sobic009G002000--Sobic009G030400 Sobic009G201800 Sobic009G201800 Sobic009G002000--Sobic009G201800 Sobic009G002000--Sobic001G115500 Sobic008G118500 Sobic008G118500 Sobic009G002000--Sobic008G118500 Sobic009G002000--Sobic005G084900 Sobic009G102900 Sobic009G102900 Sobic009G002000--Sobic009G102900 Sobic001G157600 Sobic001G157600 Sobic009G002000--Sobic001G157600 Sobic009G258500 Sobic009G258500 Sobic009G002000--Sobic009G258500 Sobic009G239600 Sobic009G239600 Sobic001G302900--Sobic009G239600 Sobic001G302900--Sobic002G280900 Sobic005G160200 Sobic005G160200 Sobic001G302900--Sobic005G160200 Sobic002G322400 Sobic002G322400 Sobic001G302900--Sobic002G322400 Sobic001G302900--Sobic004G145600 Sobic001G302900--Sobic001G455000 Sobic007G153500 Sobic007G153500 Sobic001G302900--Sobic007G153500 Sobic008G018200 Sobic008G018200 Sobic001G302900--Sobic008G018200 Sobic001G302900--Sobic007G140600 Sobic008G050700 Sobic008G050700 Sobic007G140600--Sobic008G050700 Sobic003G308300 Sobic003G308300 Sobic007G140600--Sobic003G308300 Sobic001G347700 Sobic001G347700 Sobic007G140600--Sobic001G347700 Sobic001G457000 Sobic001G457000 Sobic007G140600--Sobic001G457000 Sobic003G346500 Sobic003G346500 Sobic007G140600--Sobic003G346500 Sobic010G028400 Sobic010G028400 Sobic007G140600--Sobic010G028400 Sobic001G485300 Sobic001G485300 Sobic007G140600--Sobic001G485300 Sobic010G069500 Sobic010G069500 Sobic007G140600--Sobic010G069500 Sobic004G011700 Sobic004G011700 Sobic007G140600--Sobic004G011700
Octagon: transcription factors


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