Gene annotation
Transcriptome id Sobic.001G432100.1,Sobic.001G432100.3,Sobic.001G432100.2
Synonym Sb01g040650
Functional annotation expressed protein
UniProt A0A1B6QP97
Pfam -
Panther DB PTHR37738 PTHR37738:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29280 : -
RAP-DB (Rice) LOC_Os03g15190.1 : expressed protein
MaizeGDB (Corn) Zm00025a001664
Brachypodium KQK22505
Barley -
Wheat TraesCS4A02G084600 , TraesCS4B02G219600 , TraesCS4D02G220000 , TraesCS4D02G220000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G218000 VIP1 protein, putative, expressed -
2 Sobic.007G010200 - -
3 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
4 Sobic.007G036800 xylosyltransferase, putative, expressed -
5 Sobic.004G145600 expressed protein -
6 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
7 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
8 Sobic.004G229000 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
9 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
10 Sobic.003G109200 expressed protein -
11 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
12 Sobic.003G010900 expressed protein -
13 Sobic.004G129500 expressed protein -
14 Sobic.006G120200 Rf1, mitochondrial precursor, putative, expressed -
15 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
16 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
17 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
18 Sobic.001G229300 expressed protein -
19 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
20 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma


Gene co-expression network
sample Sobic001G432100 Sobic001G432100 Sobic009G218000 Sobic009G218000 Sobic001G432100--Sobic009G218000 Sobic007G010200 Sobic007G010200 Sobic001G432100--Sobic007G010200 Sobic007G031100 Sobic007G031100 Sobic001G432100--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic001G432100--Sobic007G036800 Sobic004G145600 Sobic004G145600 Sobic001G432100--Sobic004G145600 Sobic002G280900 Sobic002G280900 Sobic001G432100--Sobic002G280900 Sobic010G018900 Sobic010G018900 Sobic001G432100--Sobic010G018900 Sobic004G229000 Sobic004G229000 Sobic001G432100--Sobic004G229000 Sobic004G354100 Sobic004G354100 Sobic001G432100--Sobic004G354100 Sobic006G153200 Sobic006G153200 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic003G167000 Sobic003G167000 Sobic009G218000--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic001G352800 Sobic001G352800 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic008G011800 Sobic008G011800 Sobic009G218000--Sobic008G011800 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G010200--Sobic007G031100 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic003G304800 Sobic003G304800 Sobic007G010200--Sobic003G304800 Sobic007G010200--Sobic001G309200 Sobic007G010200--Sobic010G018900 Sobic007G031100--Sobic007G010200 Sobic007G031100--Sobic001G432100 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic001G188700 Sobic001G188700 Sobic007G031100--Sobic001G188700 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic004G129500 Sobic004G129500 Sobic007G036800--Sobic004G129500 Sobic010G103500 Sobic010G103500 Sobic007G036800--Sobic010G103500 Sobic007G036800--Sobic004G145600 Sobic007G036800--Sobic008G112100 Sobic010G059700 Sobic010G059700 Sobic007G036800--Sobic010G059700 Sobic007G036800--Sobic007G010200 Sobic004G350200 Sobic004G350200 Sobic007G036800--Sobic004G350200 Sobic002G123600 Sobic002G123600 Sobic007G036800--Sobic002G123600 Sobic004G256300 Sobic004G256300 Sobic007G036800--Sobic004G256300 Sobic004G145600--Sobic007G036800 Sobic003G010900 Sobic003G010900 Sobic004G145600--Sobic003G010900 Sobic004G084400 Sobic004G084400 Sobic004G145600--Sobic004G084400 Sobic003G005900 Sobic003G005900 Sobic004G145600--Sobic003G005900 Sobic005G040900 Sobic005G040900 Sobic004G145600--Sobic005G040900 Sobic003G062400 Sobic003G062400 Sobic004G145600--Sobic003G062400 Sobic007G148400 Sobic007G148400 Sobic004G145600--Sobic007G148400 Sobic003G222700 Sobic003G222700 Sobic004G145600--Sobic003G222700 Sobic004G145600--Sobic010G059700 Sobic002G280900--Sobic010G059700 Sobic001G506000 Sobic001G506000 Sobic002G280900--Sobic001G506000 Sobic002G280900--Sobic007G031100 Sobic002G280900--Sobic001G432100 Sobic004G151200 Sobic004G151200 Sobic002G280900--Sobic004G151200 Sobic005G084900 Sobic005G084900 Sobic002G280900--Sobic005G084900 Sobic009G002000 Sobic009G002000 Sobic002G280900--Sobic009G002000 Sobic001G302900 Sobic001G302900 Sobic002G280900--Sobic001G302900 Sobic007G140600 Sobic007G140600 Sobic002G280900--Sobic007G140600 Sobic002G308000 Sobic002G308000 Sobic010G018900--Sobic002G308000 Sobic010G257500 Sobic010G257500 Sobic010G018900--Sobic010G257500 Sobic004G007700 Sobic004G007700 Sobic010G018900--Sobic004G007700 Sobic002G066800 Sobic002G066800 Sobic010G018900--Sobic002G066800 Sobic010G038900 Sobic010G038900 Sobic010G018900--Sobic010G038900 Sobic002G271400 Sobic002G271400 Sobic010G018900--Sobic002G271400 Sobic010G269800 Sobic010G269800 Sobic010G018900--Sobic010G269800 Sobic009G063800 Sobic009G063800 Sobic010G018900--Sobic009G063800 Sobic006G272300 Sobic006G272300 Sobic010G018900--Sobic006G272300 Sobic004G229000--Sobic007G010200 Sobic004G229000--Sobic007G036800 Sobic004G229000--Sobic003G304800 Sobic004G229000--Sobic001G432100 Sobic003G109200 Sobic003G109200 Sobic004G229000--Sobic003G109200 Sobic008G125000 Sobic008G125000 Sobic004G229000--Sobic008G125000 Sobic004G229000--Sobic007G031100 Sobic004G229000--Sobic004G129500 Sobic004G229000--Sobic001G188700 Sobic001G229300 Sobic001G229300 Sobic004G354100--Sobic001G229300 Sobic004G354100--Sobic003G085500 Sobic010G002800 Sobic010G002800 Sobic004G354100--Sobic010G002800 Sobic001G191900 Sobic001G191900 Sobic004G354100--Sobic001G191900 Sobic004G354100--Sobic004G256300 Sobic007G022700 Sobic007G022700 Sobic004G354100--Sobic007G022700 Sobic001G203500 Sobic001G203500 Sobic004G354100--Sobic001G203500 Sobic002G153400 Sobic002G153400 Sobic004G354100--Sobic002G153400 Sobic004G354100--Sobic001G485300
Octagon: transcription factors


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