Gene annotation
Transcriptome id Sobic.002G250550.1
Synonym -
Functional annotation -
UniProt A0A1W0W5N6
Pfam -
Panther DB PTHR32219:SF6 PTHR32219
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20970 : -
RAP-DB (Rice) LOC_Os08g40250.1 : expressed protein
MaizeGDB (Corn) Zm00025a047482 , Zm00025a014229 , Zm00025a053699
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
2 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
3 Sobic.005G064100 expressed protein -
4 Sobic.006G200901 - -
5 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
6 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
7 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
9 Sobic.001G302900 oxysterol-binding protein, putative, expressed -
10 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
11 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
12 Sobic.002G253900 growth regulator related protein, putative, expressed -
13 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
14 Sobic.001G154200 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase
16 Sobic.010G103500 ATMAP70 protein, putative, expressed -
17 Sobic.009G190200 transcription elongation factor SPT5 homolog 1, putative, expressed -
18 Sobic.004G306100 expressed protein -
19 Sobic.001G399600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.002G142700 PPR repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G250550 Sobic002G250550 Sobic002G280900 Sobic002G280900 Sobic002G250550--Sobic002G280900 Sobic003G298900 Sobic003G298900 Sobic002G250550--Sobic003G298900 Sobic005G064100 Sobic005G064100 Sobic002G250550--Sobic005G064100 Sobic006G200901 Sobic006G200901 Sobic002G250550--Sobic006G200901 Sobic009G254000 Sobic009G254000 Sobic002G250550--Sobic009G254000 Sobic004G014100 Sobic004G014100 Sobic002G250550--Sobic004G014100 Sobic002G271400 Sobic002G271400 Sobic002G250550--Sobic002G271400 Sobic003G103701 Sobic003G103701 Sobic002G250550--Sobic003G103701 Sobic001G302900 Sobic001G302900 Sobic002G250550--Sobic001G302900 Sobic010G059700 Sobic010G059700 Sobic002G280900--Sobic010G059700 Sobic001G506000 Sobic001G506000 Sobic002G280900--Sobic001G506000 Sobic007G031100 Sobic007G031100 Sobic002G280900--Sobic007G031100 Sobic001G432100 Sobic001G432100 Sobic002G280900--Sobic001G432100 Sobic004G151200 Sobic004G151200 Sobic002G280900--Sobic004G151200 Sobic005G084900 Sobic005G084900 Sobic002G280900--Sobic005G084900 Sobic009G002000 Sobic009G002000 Sobic002G280900--Sobic009G002000 Sobic002G280900--Sobic001G302900 Sobic007G140600 Sobic007G140600 Sobic002G280900--Sobic007G140600 Sobic002G006100 Sobic002G006100 Sobic003G298900--Sobic002G006100 Sobic001G540700 Sobic001G540700 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic007G197100 Sobic007G197100 Sobic003G298900--Sobic007G197100 Sobic005G064100--Sobic003G298900 Sobic008G174966 Sobic008G174966 Sobic005G064100--Sobic008G174966 Sobic001G507200 Sobic001G507200 Sobic005G064100--Sobic001G507200 Sobic001G437500 Sobic001G437500 Sobic005G064100--Sobic001G437500 Sobic003G409600 Sobic003G409600 Sobic005G064100--Sobic003G409600 Sobic004G093400 Sobic004G093400 Sobic005G064100--Sobic004G093400 Sobic002G320600 Sobic002G320600 Sobic005G064100--Sobic002G320600 Sobic006G071628 Sobic006G071628 Sobic005G064100--Sobic006G071628 Sobic009G061000 Sobic009G061000 Sobic005G064100--Sobic009G061000 Sobic002G343000 Sobic002G343000 Sobic006G200901--Sobic002G343000 Sobic006G143300 Sobic006G143300 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic009G148000 Sobic009G148000 Sobic006G200901--Sobic009G148000 Sobic006G200901--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic006G200901--Sobic003G217500 Sobic006G186300 Sobic006G186300 Sobic006G200901--Sobic006G186300 Sobic002G230400 Sobic002G230400 Sobic006G200901--Sobic002G230400 Sobic004G075700 Sobic004G075700 Sobic006G200901--Sobic004G075700 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic009G254000--Sobic007G197100 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic004G014100--Sobic006G140300 Sobic004G306100 Sobic004G306100 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic004G050300 Sobic004G050300 Sobic003G103701--Sobic004G050300 Sobic002G056000 Sobic002G056000 Sobic003G103701--Sobic002G056000 Sobic003G103701--Sobic006G200901 Sobic003G180100 Sobic003G180100 Sobic003G103701--Sobic003G180100 Sobic003G161800 Sobic003G161800 Sobic003G103701--Sobic003G161800 Sobic003G103701--Sobic009G148000 Sobic001G067000 Sobic001G067000 Sobic003G103701--Sobic001G067000 Sobic009G068700 Sobic009G068700 Sobic003G103701--Sobic009G068700 Sobic001G429200 Sobic001G429200 Sobic003G103701--Sobic001G429200 Sobic009G239600 Sobic009G239600 Sobic001G302900--Sobic009G239600 Sobic001G302900--Sobic002G280900 Sobic001G302900--Sobic005G160200 Sobic002G322400 Sobic002G322400 Sobic001G302900--Sobic002G322400 Sobic004G145600 Sobic004G145600 Sobic001G302900--Sobic004G145600 Sobic001G455000 Sobic001G455000 Sobic001G302900--Sobic001G455000 Sobic007G153500 Sobic007G153500 Sobic001G302900--Sobic007G153500 Sobic008G018200 Sobic008G018200 Sobic001G302900--Sobic008G018200 Sobic001G302900--Sobic007G140600
Octagon: transcription factors


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