Gene annotation
Transcriptome id Sobic.001G399600.1
Synonym Sb01g037830
Functional annotation zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
UniProt A0A1Z5S9Z4
Pfam PF00642
Panther DB PTHR12547 PTHR12547:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66810 : Zinc finger C-x8-C-x5-C-x3-H type family protein
RAP-DB (Rice) LOC_Os03g18950.1 : zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
MaizeGDB (Corn) Zm00025a038679 , Zm00025a028258 , Zm00025a044672
Brachypodium PNT72490 , PNT72491 , KQK04744 , KQK04743 , KQK22053
Barley HORVU3Hr1G057920.2 , HORVU3Hr1G057920.1 , HORVU3Hr1G057920.6 , HORVU3Hr1G057920.7 , HORVU3Hr1G057920.4 , HORVU3Hr1G057920.5 , HORVU4Hr1G054650.1 , HORVU4Hr1G054650.4 , HORVU4Hr1G054650.2 , HORVU4Hr1G054650.3 , HORVU1Hr1G090910.1 , HORVU1Hr1G090910.2
Wheat TraesCS4A02G117400 , TraesCS4A02G117400 , TraesCS4D02G188300 , TraesCS1D02G421800 , TraesCS1A02G414400 , TraesCS3D02G220700 , TraesCS1B02G444500 , TraesCS1B02G444500 , TraesCS3D02G220700 , TraesCS4D02G188300 , TraesCS4B02G187000 , TraesCS3A02G232500 , TraesCS3A02G232500 , TraesCS3B02G261800 , TraesCS3B02G261800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
2 Sobic.006G140300 expressed protein -
3 Sobic.007G167300 zinc-binding protein, putative, expressed -
4 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
5 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
6 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
7 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
8 Sobic.003G363300 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.008G176300 YABBY domain containing protein, putative, expressed -
10 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
11 Sobic.001G053700 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
12 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
13 Sobic.006G004300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.006G200901 - -
15 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
16 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
17 Sobic.007G128400 expressed protein -
18 Sobic.002G250550 - -
19 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
20 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase


Gene co-expression network
sample Sobic001G399600 Sobic001G399600 Sobic010G180200 Sobic010G180200 Sobic001G399600--Sobic010G180200 Sobic006G140300 Sobic006G140300 Sobic001G399600--Sobic006G140300 Sobic007G167300 Sobic007G167300 Sobic001G399600--Sobic007G167300 Sobic004G014100 Sobic004G014100 Sobic001G399600--Sobic004G014100 Sobic009G254000 Sobic009G254000 Sobic001G399600--Sobic009G254000 Sobic010G237800 Sobic010G237800 Sobic001G399600--Sobic010G237800 Sobic006G143300 Sobic006G143300 Sobic001G399600--Sobic006G143300 Sobic003G363300 Sobic003G363300 Sobic001G399600--Sobic003G363300 Sobic008G176300 Sobic008G176300 Sobic001G399600--Sobic008G176300 Sobic003G402100 Sobic003G402100 Sobic010G180200--Sobic003G402100 Sobic001G053700 Sobic001G053700 Sobic010G180200--Sobic001G053700 Sobic001G324800 Sobic001G324800 Sobic010G180200--Sobic001G324800 Sobic006G066400 Sobic006G066400 Sobic010G180200--Sobic006G066400 Sobic010G180200--Sobic004G014100 Sobic001G394900 Sobic001G394900 Sobic010G180200--Sobic001G394900 Sobic007G023600 Sobic007G023600 Sobic010G180200--Sobic007G023600 Sobic004G218000 Sobic004G218000 Sobic010G180200--Sobic004G218000 Sobic010G212700 Sobic010G212700 Sobic010G180200--Sobic010G212700 Sobic006G140300--Sobic004G014100 Sobic006G140300--Sobic009G254000 Sobic006G140300--Sobic010G180200 Sobic003G217500 Sobic003G217500 Sobic006G140300--Sobic003G217500 Sobic006G140300--Sobic007G023600 Sobic006G140300--Sobic006G066400 Sobic006G200901 Sobic006G200901 Sobic006G140300--Sobic006G200901 Sobic001G423300 Sobic001G423300 Sobic006G140300--Sobic001G423300 Sobic004G250600 Sobic004G250600 Sobic006G140300--Sobic004G250600 Sobic002G123100 Sobic002G123100 Sobic007G167300--Sobic002G123100 Sobic007G167300--Sobic001G324800 Sobic002G349000 Sobic002G349000 Sobic007G167300--Sobic002G349000 Sobic001G150300 Sobic001G150300 Sobic007G167300--Sobic001G150300 Sobic007G167300--Sobic004G014100 Sobic002G099866 Sobic002G099866 Sobic007G167300--Sobic002G099866 Sobic004G340566 Sobic004G340566 Sobic007G167300--Sobic004G340566 Sobic007G167300--Sobic001G394900 Sobic008G011400 Sobic008G011400 Sobic007G167300--Sobic008G011400 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic004G014100--Sobic006G143300 Sobic003G343200 Sobic003G343200 Sobic004G014100--Sobic003G343200 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic004G014100--Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic003G289700 Sobic003G289700 Sobic010G237800--Sobic003G289700 Sobic008G070700 Sobic008G070700 Sobic010G237800--Sobic008G070700 Sobic001G158300 Sobic001G158300 Sobic010G237800--Sobic001G158300 Sobic006G106200 Sobic006G106200 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic002G374200 Sobic002G374200 Sobic010G237800--Sobic002G374200 Sobic010G237800--Sobic010G212700 Sobic007G153700 Sobic007G153700 Sobic010G237800--Sobic007G153700 Sobic002G196500 Sobic002G196500 Sobic010G237800--Sobic002G196500 Sobic005G033700 Sobic005G033700 Sobic006G143300--Sobic005G033700 Sobic006G143300--Sobic006G200901 Sobic006G143300--Sobic002G343000 Sobic006G143300--Sobic004G014100 Sobic001G081800 Sobic001G081800 Sobic006G143300--Sobic001G081800 Sobic006G143300--Sobic002G349000 Sobic006G143300--Sobic002G230400 Sobic005G164800 Sobic005G164800 Sobic006G143300--Sobic005G164800 Sobic006G186300 Sobic006G186300 Sobic006G143300--Sobic006G186300 Sobic006G271400 Sobic006G271400 Sobic003G363300--Sobic006G271400 Sobic005G075000 Sobic005G075000 Sobic003G363300--Sobic005G075000 Sobic006G279000 Sobic006G279000 Sobic003G363300--Sobic006G279000 Sobic005G074900 Sobic005G074900 Sobic003G363300--Sobic005G074900 Sobic010G209300 Sobic010G209300 Sobic003G363300--Sobic010G209300 Sobic006G036201 Sobic006G036201 Sobic003G363300--Sobic006G036201 Sobic002G147500 Sobic002G147500 Sobic003G363300--Sobic002G147500 Sobic006G031000 Sobic006G031000 Sobic003G363300--Sobic006G031000 Sobic001G330600 Sobic001G330600 Sobic003G363300--Sobic001G330600 Sobic006G064700 Sobic006G064700 Sobic008G176300--Sobic006G064700 Sobic009G039900 Sobic009G039900 Sobic008G176300--Sobic009G039900 Sobic009G039100 Sobic009G039100 Sobic008G176300--Sobic009G039100 Sobic005G148600 Sobic005G148600 Sobic008G176300--Sobic005G148600 Sobic007G128400 Sobic007G128400 Sobic008G176300--Sobic007G128400 Sobic006G117300 Sobic006G117300 Sobic008G176300--Sobic006G117300 Sobic005G090500 Sobic005G090500 Sobic008G176300--Sobic005G090500 Sobic005G153400 Sobic005G153400 Sobic008G176300--Sobic005G153400 Sobic005G074800 Sobic005G074800 Sobic008G176300--Sobic005G074800
Octagon: transcription factors


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