Gene annotation
Transcriptome id Sobic.005G032400.1
Synonym TRO, Sb05g002730
Functional annotation ASH-like SPRY domain containing protein, putative, expressed
UniProt C5Y4J4
Pfam PF00622
Panther DB PTHR10598
NCBI CDD -
KEGG Orthology K14964; Set1/Ash2 histone methyltransferase complex subunit ASH2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G51450 : TRAUCO
RAP-DB (Rice) LOC_Os11g04930.1 : ASH-like SPRY domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a013045
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G032400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G004500 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.010G262900 expressed protein -
3 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.001G053700 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
6 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
7 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
8 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
9 Sobic.008G045800 PHD-finger family protein, expressed -
10 Sobic.001G033400 protein kinase domain containing protein, expressed -
11 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
12 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
13 Sobic.002G103700 - -
14 Sobic.010G250900 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
15 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.001G462401 - -
17 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
18 Sobic.007G153700 transcription regulator, putative, expressed -
19 Sobic.010G197800 expressed protein -
20 Sobic.010G207400 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic005G032400 Sobic005G032400 Sobic003G004500 Sobic003G004500 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic003G415100 Sobic003G415100 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G050600 Sobic005G050600 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic010G250900 Sobic010G250900 Sobic003G004500--Sobic010G250900 Sobic003G004500--Sobic005G050600 Sobic008G064250 Sobic008G064250 Sobic003G004500--Sobic008G064250 Sobic003G425600 Sobic003G425600 Sobic003G004500--Sobic003G425600 Sobic005G083160 Sobic005G083160 Sobic003G004500--Sobic005G083160 Sobic003G004500--Sobic005G032400 Sobic010G107300 Sobic010G107300 Sobic003G004500--Sobic010G107300 Sobic001G233900 Sobic001G233900 Sobic003G004500--Sobic001G233900 Sobic007G018200 Sobic007G018200 Sobic003G004500--Sobic007G018200 Sobic003G035500 Sobic003G035500 Sobic010G262900--Sobic003G035500 Sobic010G262900--Sobic008G045800 Sobic010G262900--Sobic003G415100 Sobic009G257500 Sobic009G257500 Sobic010G262900--Sobic009G257500 Sobic010G262900--Sobic005G032400 Sobic008G156200 Sobic008G156200 Sobic010G262900--Sobic008G156200 Sobic010G189100 Sobic010G189100 Sobic010G262900--Sobic010G189100 Sobic010G262900--Sobic003G004500 Sobic001G033400 Sobic001G033400 Sobic010G262900--Sobic001G033400 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic003G402100 Sobic003G402100 Sobic001G053700--Sobic003G402100 Sobic002G360900 Sobic002G360900 Sobic001G053700--Sobic002G360900 Sobic002G381750 Sobic002G381750 Sobic001G053700--Sobic002G381750 Sobic001G053700--Sobic010G180200 Sobic001G394900 Sobic001G394900 Sobic001G053700--Sobic001G394900 Sobic004G254400 Sobic004G254400 Sobic001G053700--Sobic004G254400 Sobic001G324800 Sobic001G324800 Sobic001G053700--Sobic001G324800 Sobic001G259300 Sobic001G259300 Sobic001G053700--Sobic001G259300 Sobic003G323000 Sobic003G323000 Sobic001G053700--Sobic003G323000 Sobic003G192000 Sobic003G192000 Sobic002G403200--Sobic003G192000 Sobic010G207400 Sobic010G207400 Sobic002G403200--Sobic010G207400 Sobic002G359900 Sobic002G359900 Sobic002G403200--Sobic002G359900 Sobic004G272900 Sobic004G272900 Sobic002G403200--Sobic004G272900 Sobic002G403200--Sobic001G033400 Sobic008G160500 Sobic008G160500 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic009G030400 Sobic009G030400 Sobic002G403200--Sobic009G030400 Sobic002G403200--Sobic005G032400 Sobic005G050600--Sobic003G004500 Sobic005G050600--Sobic001G033400 Sobic003G412200 Sobic003G412200 Sobic005G050600--Sobic003G412200 Sobic001G041400 Sobic001G041400 Sobic005G050600--Sobic001G041400 Sobic007G018700 Sobic007G018700 Sobic005G050600--Sobic007G018700 Sobic005G050600--Sobic005G032400 Sobic001G042800 Sobic001G042800 Sobic005G050600--Sobic001G042800 Sobic005G050600--Sobic010G250900 Sobic005G050600--Sobic008G160500 Sobic004G262100 Sobic004G262100 Sobic009G156200--Sobic004G262100 Sobic009G156200--Sobic001G053700 Sobic002G349000 Sobic002G349000 Sobic009G156200--Sobic002G349000 Sobic009G156200--Sobic002G360900 Sobic003G042200 Sobic003G042200 Sobic009G156200--Sobic003G042200 Sobic004G340566 Sobic004G340566 Sobic009G156200--Sobic004G340566 Sobic009G156200--Sobic002G381750 Sobic009G234500 Sobic009G234500 Sobic009G156200--Sobic009G234500 Sobic003G062101 Sobic003G062101 Sobic009G156200--Sobic003G062101 Sobic010G180200--Sobic003G402100 Sobic010G180200--Sobic001G053700 Sobic010G180200--Sobic001G324800 Sobic006G066400 Sobic006G066400 Sobic010G180200--Sobic006G066400 Sobic004G014100 Sobic004G014100 Sobic010G180200--Sobic004G014100 Sobic010G180200--Sobic001G394900 Sobic007G023600 Sobic007G023600 Sobic010G180200--Sobic007G023600 Sobic004G218000 Sobic004G218000 Sobic010G180200--Sobic004G218000 Sobic010G212700 Sobic010G212700 Sobic010G180200--Sobic010G212700 Sobic001G005800 Sobic001G005800 Sobic008G045800--Sobic001G005800 Sobic008G045800--Sobic009G257500 Sobic008G045800--Sobic004G014100 Sobic008G045800--Sobic010G262900 Sobic008G045800--Sobic010G180200 Sobic006G200901 Sobic006G200901 Sobic008G045800--Sobic006G200901 Sobic002G230400 Sobic002G230400 Sobic008G045800--Sobic002G230400 Sobic010G236200 Sobic010G236200 Sobic008G045800--Sobic010G236200 Sobic004G075700 Sobic004G075700 Sobic008G045800--Sobic004G075700
Octagon: transcription factors


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