Gene annotation
Transcriptome id Sobic.003G004500.1
Synonym Sb03g000570, AIB, ATAIB
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt C5XJK2
Pfam PF00010 PF14215
Panther DB PTHR11514 PTHR11514:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46510 : ABA-inducible BHLH-type transcription factor
RAP-DB (Rice) LOC_Os01g13460.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022797 , Zm00025a028109 , Zm00025a036006
Brachypodium PNT70227 , KQK03473
Barley HORVU3Hr1G057280.3 , HORVU3Hr1G057280.2 , HORVU3Hr1G057280.6 , HORVU3Hr1G057280.5 , HORVU3Hr1G057280.4
Wheat TraesCS3D02G166300 , TraesCS3B02G185400
Populus -


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cDNA sequences
Sobic.003G004500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G250900 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
2 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
3 Sobic.008G064250 - -
4 Sobic.003G425600 - -
5 Sobic.005G083160 - -
6 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
7 Sobic.010G107300 - -
8 Sobic.001G233900 expressed protein -
9 Sobic.007G018200 RNA recognition motif containing protein, putative, expressed -
10 Sobic.001G033400 protein kinase domain containing protein, expressed -
11 Sobic.001G367700 rhythmically expressed gene 2 protein, putative, expressed -
12 Sobic.004G329800 BHLH transcription factor, putative, expressed -
13 Sobic.002G360900 GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
14 Sobic.002G016250 - -
15 Sobic.004G037300 cycloartenol synthase, putative, expressed -
16 Sobic.001G452100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.007G078300 serine/threonine-protein kinase HT1, putative, expressed -
18 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
19 Sobic.003G101200 paired amphipathic helix repeat-containing protein, putative, expressed -
20 Sobic.009G218100 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB


Gene co-expression network
sample Sobic003G004500 Sobic003G004500 Sobic010G250900 Sobic010G250900 Sobic003G004500--Sobic010G250900 Sobic005G050600 Sobic005G050600 Sobic003G004500--Sobic005G050600 Sobic008G064250 Sobic008G064250 Sobic003G004500--Sobic008G064250 Sobic003G425600 Sobic003G425600 Sobic003G004500--Sobic003G425600 Sobic005G083160 Sobic005G083160 Sobic003G004500--Sobic005G083160 Sobic005G032400 Sobic005G032400 Sobic003G004500--Sobic005G032400 Sobic010G107300 Sobic010G107300 Sobic003G004500--Sobic010G107300 Sobic001G233900 Sobic001G233900 Sobic003G004500--Sobic001G233900 Sobic007G018200 Sobic007G018200 Sobic003G004500--Sobic007G018200 Sobic010G250900--Sobic003G004500 Sobic004G329800 Sobic004G329800 Sobic010G250900--Sobic004G329800 Sobic004G037300 Sobic004G037300 Sobic010G250900--Sobic004G037300 Sobic010G250900--Sobic008G064250 Sobic010G250900--Sobic005G083160 Sobic001G367700 Sobic001G367700 Sobic010G250900--Sobic001G367700 Sobic010G250900--Sobic010G107300 Sobic002G360900 Sobic002G360900 Sobic010G250900--Sobic002G360900 Sobic010G250900--Sobic001G233900 Sobic005G050600--Sobic003G004500 Sobic001G033400 Sobic001G033400 Sobic005G050600--Sobic001G033400 Sobic003G412200 Sobic003G412200 Sobic005G050600--Sobic003G412200 Sobic001G041400 Sobic001G041400 Sobic005G050600--Sobic001G041400 Sobic007G018700 Sobic007G018700 Sobic005G050600--Sobic007G018700 Sobic005G050600--Sobic005G032400 Sobic001G042800 Sobic001G042800 Sobic005G050600--Sobic001G042800 Sobic005G050600--Sobic010G250900 Sobic008G160500 Sobic008G160500 Sobic005G050600--Sobic008G160500 Sobic002G016250 Sobic002G016250 Sobic008G064250--Sobic002G016250 Sobic005G165632 Sobic005G165632 Sobic008G064250--Sobic005G165632 Sobic003G342000 Sobic003G342000 Sobic008G064250--Sobic003G342000 Sobic009G218100 Sobic009G218100 Sobic008G064250--Sobic009G218100 Sobic008G113350 Sobic008G113350 Sobic008G064250--Sobic008G113350 Sobic008G064250--Sobic004G037300 Sobic008G064250--Sobic005G083160 Sobic008G064250--Sobic001G233900 Sobic008G064250--Sobic010G107300 Sobic003G425600--Sobic005G083160 Sobic003G425600--Sobic010G107300 Sobic001G452100 Sobic001G452100 Sobic003G425600--Sobic001G452100 Sobic002G015800 Sobic002G015800 Sobic003G425600--Sobic002G015800 Sobic003G425600--Sobic009G218100 Sobic010G022600 Sobic010G022600 Sobic003G425600--Sobic010G022600 Sobic003G425600--Sobic003G004500 Sobic003G101200 Sobic003G101200 Sobic003G425600--Sobic003G101200 Sobic003G425600--Sobic008G064250 Sobic005G083160--Sobic010G107300 Sobic005G226150 Sobic005G226150 Sobic005G083160--Sobic005G226150 Sobic005G083160--Sobic010G022600 Sobic008G088881 Sobic008G088881 Sobic005G083160--Sobic008G088881 Sobic005G083160--Sobic009G218100 Sobic005G083160--Sobic002G360900 Sobic005G083160--Sobic001G233900 Sobic005G083160--Sobic003G101200 Sobic003G323000 Sobic003G323000 Sobic005G083160--Sobic003G323000 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic003G415100 Sobic003G415100 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic010G107300--Sobic005G083160 Sobic010G107300--Sobic005G226150 Sobic010G107300--Sobic010G022600 Sobic010G107300--Sobic008G088881 Sobic010G107300--Sobic002G360900 Sobic010G107300--Sobic001G233900 Sobic003G247700 Sobic003G247700 Sobic010G107300--Sobic003G247700 Sobic010G107300--Sobic003G323000 Sobic007G070700 Sobic007G070700 Sobic010G107300--Sobic007G070700 Sobic001G233900--Sobic008G088881 Sobic001G233900--Sobic005G226150 Sobic005G225000 Sobic005G225000 Sobic001G233900--Sobic005G225000 Sobic005G199101 Sobic005G199101 Sobic001G233900--Sobic005G199101 Sobic010G153800 Sobic010G153800 Sobic001G233900--Sobic010G153800 Sobic002G091800 Sobic002G091800 Sobic001G233900--Sobic002G091800 Sobic001G233900--Sobic010G107300 Sobic002G344900 Sobic002G344900 Sobic001G233900--Sobic002G344900 Sobic010G148600 Sobic010G148600 Sobic001G233900--Sobic010G148600 Sobic007G018200--Sobic003G004500 Sobic001G517500 Sobic001G517500 Sobic007G018200--Sobic001G517500 Sobic001G005600 Sobic001G005600 Sobic007G018200--Sobic001G005600 Sobic004G160700 Sobic004G160700 Sobic007G018200--Sobic004G160700 Sobic007G046200 Sobic007G046200 Sobic007G018200--Sobic007G046200 Sobic004G068500 Sobic004G068500 Sobic007G018200--Sobic004G068500 Sobic004G180900 Sobic004G180900 Sobic007G018200--Sobic004G180900 Sobic002G277300 Sobic002G277300 Sobic007G018200--Sobic002G277300 Sobic007G018200--Sobic008G160500
Octagon: transcription factors


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