Gene annotation
Transcriptome id Sobic.001G033400.1
Synonym Sb01g003130, PK1B, APK1B
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WV03
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF113
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G28930 : protein kinase 1B
RAP-DB (Rice) LOC_Os03g60710.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008817 , Zm00025a016422
Brachypodium -
Barley HORVU5Hr1G113300.2 , HORVU5Hr1G113300.7 , HORVU5Hr1G113300.6 , HORVU5Hr1G113300.5 , HORVU5Hr1G113300.4
Wheat TraesCS5B02G493500 , TraesCS5B02G493500 , TraesCS5A02G480600 , TraesCS5A02G480600 , TraesCS5D02G493800 , TraesCS5D02G493800 , TraesCS5B02G494300 , TraesCS5B02G494300 , TraesCS5B02G494300
Populus -


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cDNA sequences
Sobic.001G033400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
2 Sobic.002G341100 bromodomain domain containing protein, expressed -
3 Sobic.010G207400 protein kinase domain containing protein, expressed -
4 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
5 Sobic.007G078300 serine/threonine-protein kinase HT1, putative, expressed -
6 Sobic.003G004500 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.010G189100 expressed protein -
8 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
9 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
10 Sobic.009G025100 transporter, putative, expressed -
11 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
12 Sobic.010G262900 expressed protein -
13 Sobic.001G170500 expressed protein -
14 Sobic.003G412200 inducer of CBF expression 2, putative, expressed -
15 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
16 Sobic.003G174200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G400400 choline transporter-related, putative, expressed -
18 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
19 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
20 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G033400 Sobic001G033400 Sobic003G035500 Sobic003G035500 Sobic001G033400--Sobic003G035500 Sobic002G341100 Sobic002G341100 Sobic001G033400--Sobic002G341100 Sobic010G207400 Sobic010G207400 Sobic001G033400--Sobic010G207400 Sobic001G041400 Sobic001G041400 Sobic001G033400--Sobic001G041400 Sobic007G078300 Sobic007G078300 Sobic001G033400--Sobic007G078300 Sobic003G004500 Sobic003G004500 Sobic001G033400--Sobic003G004500 Sobic010G189100 Sobic010G189100 Sobic001G033400--Sobic010G189100 Sobic005G050600 Sobic005G050600 Sobic001G033400--Sobic005G050600 Sobic002G403200 Sobic002G403200 Sobic001G033400--Sobic002G403200 Sobic003G035500--Sobic001G033400 Sobic008G156200 Sobic008G156200 Sobic003G035500--Sobic008G156200 Sobic003G035500--Sobic007G078300 Sobic003G035500--Sobic010G189100 Sobic002G247300 Sobic002G247300 Sobic003G035500--Sobic002G247300 Sobic003G035500--Sobic010G207400 Sobic003G174200 Sobic003G174200 Sobic003G035500--Sobic003G174200 Sobic003G412200 Sobic003G412200 Sobic003G035500--Sobic003G412200 Sobic007G091200 Sobic007G091200 Sobic003G035500--Sobic007G091200 Sobic002G341100--Sobic001G033400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G095700 Sobic002G095700 Sobic002G341100--Sobic002G095700 Sobic002G067800 Sobic002G067800 Sobic002G341100--Sobic002G067800 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic004G256200 Sobic004G256200 Sobic002G341100--Sobic004G256200 Sobic006G120400 Sobic006G120400 Sobic002G341100--Sobic006G120400 Sobic005G171800 Sobic005G171800 Sobic010G207400--Sobic005G171800 Sobic004G294100 Sobic004G294100 Sobic010G207400--Sobic004G294100 Sobic009G025100 Sobic009G025100 Sobic010G207400--Sobic009G025100 Sobic003G230500 Sobic003G230500 Sobic010G207400--Sobic003G230500 Sobic010G227400 Sobic010G227400 Sobic010G207400--Sobic010G227400 Sobic010G168500 Sobic010G168500 Sobic010G207400--Sobic010G168500 Sobic009G077250 Sobic009G077250 Sobic010G207400--Sobic009G077250 Sobic008G039700 Sobic008G039700 Sobic010G207400--Sobic008G039700 Sobic001G158600 Sobic001G158600 Sobic010G207400--Sobic001G158600 Sobic001G041400--Sobic007G078300 Sobic001G041400--Sobic002G341100 Sobic001G041400--Sobic001G033400 Sobic001G042800 Sobic001G042800 Sobic001G041400--Sobic001G042800 Sobic003G022200 Sobic003G022200 Sobic001G041400--Sobic003G022200 Sobic004G329800 Sobic004G329800 Sobic001G041400--Sobic004G329800 Sobic001G041400--Sobic003G035500 Sobic010G152200 Sobic010G152200 Sobic001G041400--Sobic010G152200 Sobic001G041400--Sobic002G067800 Sobic008G013000 Sobic008G013000 Sobic007G078300--Sobic008G013000 Sobic007G078300--Sobic010G152200 Sobic009G022700 Sobic009G022700 Sobic007G078300--Sobic009G022700 Sobic003G105600 Sobic003G105600 Sobic007G078300--Sobic003G105600 Sobic009G013400 Sobic009G013400 Sobic007G078300--Sobic009G013400 Sobic002G077600 Sobic002G077600 Sobic007G078300--Sobic002G077600 Sobic009G009900 Sobic009G009900 Sobic007G078300--Sobic009G009900 Sobic002G077500 Sobic002G077500 Sobic007G078300--Sobic002G077500 Sobic001G326000 Sobic001G326000 Sobic007G078300--Sobic001G326000 Sobic010G250900 Sobic010G250900 Sobic003G004500--Sobic010G250900 Sobic003G004500--Sobic005G050600 Sobic008G064250 Sobic008G064250 Sobic003G004500--Sobic008G064250 Sobic003G425600 Sobic003G425600 Sobic003G004500--Sobic003G425600 Sobic005G083160 Sobic005G083160 Sobic003G004500--Sobic005G083160 Sobic005G032400 Sobic005G032400 Sobic003G004500--Sobic005G032400 Sobic010G107300 Sobic010G107300 Sobic003G004500--Sobic010G107300 Sobic001G233900 Sobic001G233900 Sobic003G004500--Sobic001G233900 Sobic007G018200 Sobic007G018200 Sobic003G004500--Sobic007G018200 Sobic010G189100--Sobic003G035500 Sobic010G189100--Sobic003G022200 Sobic010G189100--Sobic001G033400 Sobic009G257500 Sobic009G257500 Sobic010G189100--Sobic009G257500 Sobic006G126600 Sobic006G126600 Sobic010G189100--Sobic006G126600 Sobic010G189100--Sobic007G078300 Sobic010G262900 Sobic010G262900 Sobic010G189100--Sobic010G262900 Sobic010G189100--Sobic008G156200 Sobic010G189100--Sobic002G341100 Sobic005G050600--Sobic003G004500 Sobic005G050600--Sobic001G033400 Sobic005G050600--Sobic003G412200 Sobic005G050600--Sobic001G041400 Sobic007G018700 Sobic007G018700 Sobic005G050600--Sobic007G018700 Sobic005G050600--Sobic005G032400 Sobic005G050600--Sobic001G042800 Sobic005G050600--Sobic010G250900 Sobic008G160500 Sobic008G160500 Sobic005G050600--Sobic008G160500 Sobic003G192000 Sobic003G192000 Sobic002G403200--Sobic003G192000 Sobic002G403200--Sobic010G207400 Sobic002G359900 Sobic002G359900 Sobic002G403200--Sobic002G359900 Sobic004G272900 Sobic004G272900 Sobic002G403200--Sobic004G272900 Sobic002G403200--Sobic001G033400 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic009G030400 Sobic009G030400 Sobic002G403200--Sobic009G030400 Sobic002G403200--Sobic005G032400
Octagon: transcription factors


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