Gene annotation
Transcriptome id Sobic.002G403200.1
Synonym Sb02g041780
Functional annotation ankyrin repeat domain containing protein, putative, expressed
UniProt C5X472
Pfam PF12796
Panther DB PTHR24193 PTHR24193:SF83
NCBI CDD KOG4214; Myotrophin and similar proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12320 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g46500.1 : ankyrin repeat domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049032
Brachypodium KQK14853
Barley HORVU2Hr1G022900.1 , HORVU2Hr1G022900.3 , HORVU2Hr1G022900.2 , HORVU2Hr1G022900.4
Wheat TraesCS2D02G132700 , TraesCS2A02G130700
Populus -


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cDNA sequences
Sobic.002G403200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1
2 Sobic.010G207400 protein kinase domain containing protein, expressed -
3 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
4 Sobic.004G272900 expressed protein -
5 Sobic.001G033400 protein kinase domain containing protein, expressed -
6 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
7 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
8 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
9 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
10 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
11 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
12 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
13 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
14 Sobic.009G025100 transporter, putative, expressed -
15 Sobic.003G304500 expressed protein -
16 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
20 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -


Gene co-expression network
sample Sobic002G403200 Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic002G403200--Sobic003G192000 Sobic010G207400 Sobic010G207400 Sobic002G403200--Sobic010G207400 Sobic002G359900 Sobic002G359900 Sobic002G403200--Sobic002G359900 Sobic004G272900 Sobic004G272900 Sobic002G403200--Sobic004G272900 Sobic001G033400 Sobic001G033400 Sobic002G403200--Sobic001G033400 Sobic008G160500 Sobic008G160500 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic009G030400 Sobic009G030400 Sobic002G403200--Sobic009G030400 Sobic005G032400 Sobic005G032400 Sobic002G403200--Sobic005G032400 Sobic001G458200 Sobic001G458200 Sobic003G192000--Sobic001G458200 Sobic003G407900 Sobic003G407900 Sobic003G192000--Sobic003G407900 Sobic003G192000--Sobic002G403200 Sobic006G261100 Sobic006G261100 Sobic003G192000--Sobic006G261100 Sobic010G253100 Sobic010G253100 Sobic003G192000--Sobic010G253100 Sobic003G192000--Sobic002G359900 Sobic003G192000--Sobic009G030400 Sobic002G276900 Sobic002G276900 Sobic003G192000--Sobic002G276900 Sobic010G095700 Sobic010G095700 Sobic003G192000--Sobic010G095700 Sobic005G171800 Sobic005G171800 Sobic010G207400--Sobic005G171800 Sobic004G294100 Sobic004G294100 Sobic010G207400--Sobic004G294100 Sobic009G025100 Sobic009G025100 Sobic010G207400--Sobic009G025100 Sobic003G230500 Sobic003G230500 Sobic010G207400--Sobic003G230500 Sobic010G227400 Sobic010G227400 Sobic010G207400--Sobic010G227400 Sobic010G168500 Sobic010G168500 Sobic010G207400--Sobic010G168500 Sobic009G077250 Sobic009G077250 Sobic010G207400--Sobic009G077250 Sobic008G039700 Sobic008G039700 Sobic010G207400--Sobic008G039700 Sobic001G158600 Sobic001G158600 Sobic010G207400--Sobic001G158600 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic003G031200 Sobic003G031200 Sobic002G359900--Sobic003G031200 Sobic002G359900--Sobic001G458200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic004G272900--Sobic002G403200 Sobic008G115600 Sobic008G115600 Sobic004G272900--Sobic008G115600 Sobic003G415100 Sobic003G415100 Sobic004G272900--Sobic003G415100 Sobic010G256200 Sobic010G256200 Sobic004G272900--Sobic010G256200 Sobic001G157600 Sobic001G157600 Sobic004G272900--Sobic001G157600 Sobic002G014700 Sobic002G014700 Sobic004G272900--Sobic002G014700 Sobic002G306600 Sobic002G306600 Sobic004G272900--Sobic002G306600 Sobic003G140900 Sobic003G140900 Sobic004G272900--Sobic003G140900 Sobic004G272900--Sobic006G261100 Sobic003G035500 Sobic003G035500 Sobic001G033400--Sobic003G035500 Sobic002G341100 Sobic002G341100 Sobic001G033400--Sobic002G341100 Sobic001G033400--Sobic010G207400 Sobic001G041400 Sobic001G041400 Sobic001G033400--Sobic001G041400 Sobic007G078300 Sobic007G078300 Sobic001G033400--Sobic007G078300 Sobic003G004500 Sobic003G004500 Sobic001G033400--Sobic003G004500 Sobic010G189100 Sobic010G189100 Sobic001G033400--Sobic010G189100 Sobic005G050600 Sobic005G050600 Sobic001G033400--Sobic005G050600 Sobic001G033400--Sobic002G403200 Sobic003G062400 Sobic003G062400 Sobic008G160500--Sobic003G062400 Sobic001G005600 Sobic001G005600 Sobic008G160500--Sobic001G005600 Sobic008G160500--Sobic009G030400 Sobic008G160500--Sobic006G120800 Sobic008G160500--Sobic002G359900 Sobic008G160500--Sobic002G403200 Sobic008G160500--Sobic003G004500 Sobic009G258400 Sobic009G258400 Sobic008G160500--Sobic009G258400 Sobic008G160500--Sobic001G033400 Sobic004G196800--Sobic009G025100 Sobic004G210000 Sobic004G210000 Sobic004G196800--Sobic004G210000 Sobic006G015800 Sobic006G015800 Sobic004G196800--Sobic006G015800 Sobic004G196800--Sobic010G207400 Sobic010G047300 Sobic010G047300 Sobic004G196800--Sobic010G047300 Sobic005G077900 Sobic005G077900 Sobic004G196800--Sobic005G077900 Sobic002G293100 Sobic002G293100 Sobic004G196800--Sobic002G293100 Sobic004G038900 Sobic004G038900 Sobic004G196800--Sobic004G038900 Sobic009G033500 Sobic009G033500 Sobic004G196800--Sobic009G033500 Sobic005G030100 Sobic005G030100 Sobic009G030400--Sobic005G030100 Sobic009G002000 Sobic009G002000 Sobic009G030400--Sobic009G002000 Sobic001G067000 Sobic001G067000 Sobic009G030400--Sobic001G067000 Sobic003G161800 Sobic003G161800 Sobic009G030400--Sobic003G161800 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic010G141600 Sobic010G141600 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic005G032400--Sobic002G403200 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800
Octagon: transcription factors


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