Gene annotation
Transcriptome id Sobic.004G272900.1
Synonym
Functional annotation expressed protein
UniProt A0A194YSZ8
Pfam -
Panther DB PTHR39267 PTHR39267:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g46956.1 : expressed protein
MaizeGDB (Corn) Zm00025a032398 , Zm00025a021643
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G272900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
2 Sobic.008G115600 RNA polymerase Rpb7, N-terminal domain containing protein, expressed -
3 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.010G256200 expressed protein -
5 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
6 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
7 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
8 Sobic.003G140900 OsFBL33 - F-box domain and LRR containing protein, expressed -
9 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
10 Sobic.008G111700 expressed protein -
11 Sobic.004G258600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
12 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
13 Sobic.008G042700 E2F family transcription factor protein, putative, expressed K06620: transcription factor E2F3
14 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
15 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
16 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
17 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
18 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7
19 Sobic.001G285300 expressed protein -
20 Sobic.010G110000 asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)


Gene co-expression network
sample Sobic004G272900 Sobic004G272900 Sobic002G403200 Sobic002G403200 Sobic004G272900--Sobic002G403200 Sobic008G115600 Sobic008G115600 Sobic004G272900--Sobic008G115600 Sobic003G415100 Sobic003G415100 Sobic004G272900--Sobic003G415100 Sobic010G256200 Sobic010G256200 Sobic004G272900--Sobic010G256200 Sobic001G157600 Sobic001G157600 Sobic004G272900--Sobic001G157600 Sobic002G014700 Sobic002G014700 Sobic004G272900--Sobic002G014700 Sobic002G306600 Sobic002G306600 Sobic004G272900--Sobic002G306600 Sobic003G140900 Sobic003G140900 Sobic004G272900--Sobic003G140900 Sobic006G261100 Sobic006G261100 Sobic004G272900--Sobic006G261100 Sobic003G192000 Sobic003G192000 Sobic002G403200--Sobic003G192000 Sobic010G207400 Sobic010G207400 Sobic002G403200--Sobic010G207400 Sobic002G359900 Sobic002G359900 Sobic002G403200--Sobic002G359900 Sobic002G403200--Sobic004G272900 Sobic001G033400 Sobic001G033400 Sobic002G403200--Sobic001G033400 Sobic008G160500 Sobic008G160500 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic009G030400 Sobic009G030400 Sobic002G403200--Sobic009G030400 Sobic005G032400 Sobic005G032400 Sobic002G403200--Sobic005G032400 Sobic003G198300 Sobic003G198300 Sobic008G115600--Sobic003G198300 Sobic009G201800 Sobic009G201800 Sobic008G115600--Sobic009G201800 Sobic008G115600--Sobic004G272900 Sobic001G436300 Sobic001G436300 Sobic008G115600--Sobic001G436300 Sobic006G127500 Sobic006G127500 Sobic008G115600--Sobic006G127500 Sobic010G141600 Sobic010G141600 Sobic008G115600--Sobic010G141600 Sobic001G115500 Sobic001G115500 Sobic008G115600--Sobic001G115500 Sobic004G010700 Sobic004G010700 Sobic008G115600--Sobic004G010700 Sobic009G258500 Sobic009G258500 Sobic008G115600--Sobic009G258500 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic010G256200--Sobic001G157600 Sobic010G256200--Sobic001G123201 Sobic004G242000 Sobic004G242000 Sobic010G256200--Sobic004G242000 Sobic002G051200 Sobic002G051200 Sobic010G256200--Sobic002G051200 Sobic001G154400 Sobic001G154400 Sobic010G256200--Sobic001G154400 Sobic009G060400 Sobic009G060400 Sobic010G256200--Sobic009G060400 Sobic010G256200--Sobic009G030400 Sobic004G318400 Sobic004G318400 Sobic010G256200--Sobic004G318400 Sobic010G256200--Sobic004G272900 Sobic001G157600--Sobic010G256200 Sobic006G245700 Sobic006G245700 Sobic001G157600--Sobic006G245700 Sobic001G157600--Sobic006G127500 Sobic004G145300 Sobic004G145300 Sobic001G157600--Sobic004G145300 Sobic001G157600--Sobic001G436300 Sobic001G157600--Sobic001G115500 Sobic010G154000 Sobic010G154000 Sobic001G157600--Sobic010G154000 Sobic001G157600--Sobic002G306600 Sobic009G002000 Sobic009G002000 Sobic001G157600--Sobic009G002000 Sobic003G132700 Sobic003G132700 Sobic002G014700--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic002G014700--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic002G014700--Sobic003G420700 Sobic001G507400 Sobic001G507400 Sobic002G014700--Sobic001G507400 Sobic001G038100 Sobic001G038100 Sobic002G014700--Sobic001G038100 Sobic009G192500 Sobic009G192500 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic002G014700--Sobic003G140900 Sobic001G309100 Sobic001G309100 Sobic002G014700--Sobic001G309100 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic010G059700 Sobic010G059700 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic003G128300 Sobic003G128300 Sobic002G306600--Sobic003G128300 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic003G343600 Sobic003G343600 Sobic003G140900--Sobic003G343600 Sobic002G223300 Sobic002G223300 Sobic003G140900--Sobic002G223300 Sobic003G140900--Sobic002G014700 Sobic001G108900 Sobic001G108900 Sobic003G140900--Sobic001G108900 Sobic002G089900 Sobic002G089900 Sobic003G140900--Sobic002G089900 Sobic003G140900--Sobic007G117100 Sobic003G354100 Sobic003G354100 Sobic003G140900--Sobic003G354100 Sobic003G140900--Sobic003G132700 Sobic004G285000 Sobic004G285000 Sobic003G140900--Sobic004G285000 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic006G261100--Sobic003G354100
Octagon: transcription factors


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