Gene annotation
Transcriptome id Sobic.010G110000.1
Synonym Sb10g009590, ASN2
Functional annotation asparagine synthetase, putative, expressed
UniProt C5Z846
Pfam PF12481 PF00733
Panther DB PTHR11772 PTHR11772:SF13
NCBI CDD -
KEGG Orthology K01953; asnB, asparagine synthase (glutamine-hydrolysing)
Gene Ontology GO:0006529; asparagine biosynthetic process GO:0004066asparagine synthase (glutamine-hydrolyzing) activity


Orthologs (automatic annotation)
TAIR AT5G10240 : asparagine synthetase 3
RAP-DB (Rice) LOC_Os06g15420.1 : asparagine synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a050404
Brachypodium KQK05588 , PNT70996 , PNT70995 , KQK05590
Barley HORVU1Hr1G084370.2 , HORVU1Hr1G084370.8 , HORVU1Hr1G084370.5 , HORVU1Hr1G084370.4 , HORVU1Hr1G084370.7 , HORVU1Hr1G084370.6 , HORVU1Hr1G084370.1 , HORVU1Hr1G084370.3 , HORVU1Hr1G092110.11 , HORVU1Hr1G092110.12 , HORVU1Hr1G092110.13 , HORVU1Hr1G092110.14 , HORVU1Hr1G092110.15 , HORVU1Hr1G092110.16 , HORVU1Hr1G092110.17 , HORVU1Hr1G092110.18 , HORVU1Hr1G092110.19 , HORVU1Hr1G092110.21 , HORVU1Hr1G092110.20 , HORVU1Hr1G092110.23 , HORVU1Hr1G092110.22 , HORVU1Hr1G092110.10 , HORVU1Hr1G092110.2 , HORVU1Hr1G092110.3 , HORVU1Hr1G092110.1 , HORVU1Hr1G092110.6 , HORVU1Hr1G092110.7 , HORVU1Hr1G092110.4 , HORVU1Hr1G092110.5 , HORVU1Hr1G092110.8 , HORVU1Hr1G092110.9
Wheat TraesCS1D02G430300 , TraesCS1B02G453600 , TraesCS1D02G390500 , TraesCS1B02G453600 , TraesCS1B02G408200 , TraesCS1A02G382800 , TraesCS1A02G382800 , TraesCS1A02G422100
Populus -


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cDNA sequences
Sobic.010G110000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
2 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
3 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
4 Sobic.003G122300 mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
5 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
6 Sobic.009G069200 glycine-rich protein, putative, expressed -
7 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
8 Sobic.006G170700 START domain containing protein, putative, expressed -
9 Sobic.008G162100 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
10 Sobic.004G345100 expressed protein -
11 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
12 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
13 Sobic.004G272900 expressed protein -
14 Sobic.002G390400 expressed protein -
15 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
16 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
17 Sobic.001G204300 zinc finger, RING-type, putative, expressed -
18 Sobic.010G038900 expressed protein -
19 Sobic.005G072400 expressed protein -
20 Sobic.006G091850 - -


Gene co-expression network
sample Sobic010G110000 Sobic010G110000 Sobic003G415100 Sobic003G415100 Sobic010G110000--Sobic003G415100 Sobic009G113100 Sobic009G113100 Sobic010G110000--Sobic009G113100 Sobic005G198200 Sobic005G198200 Sobic010G110000--Sobic005G198200 Sobic003G122300 Sobic003G122300 Sobic010G110000--Sobic003G122300 Sobic008G179800 Sobic008G179800 Sobic010G110000--Sobic008G179800 Sobic009G069200 Sobic009G069200 Sobic010G110000--Sobic009G069200 Sobic002G315100 Sobic002G315100 Sobic010G110000--Sobic002G315100 Sobic006G170700 Sobic006G170700 Sobic010G110000--Sobic006G170700 Sobic008G162100 Sobic008G162100 Sobic010G110000--Sobic008G162100 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic009G113100--Sobic009G069200 Sobic009G113100--Sobic001G090300 Sobic009G113100--Sobic005G198200 Sobic001G004100 Sobic001G004100 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic009G059400 Sobic009G059400 Sobic005G198200--Sobic009G059400 Sobic005G198200--Sobic009G113100 Sobic009G137900 Sobic009G137900 Sobic005G198200--Sobic009G137900 Sobic005G072400 Sobic005G072400 Sobic005G198200--Sobic005G072400 Sobic009G017200 Sobic009G017200 Sobic005G198200--Sobic009G017200 Sobic001G472100 Sobic001G472100 Sobic005G198200--Sobic001G472100 Sobic008G111800 Sobic008G111800 Sobic005G198200--Sobic008G111800 Sobic004G180900 Sobic004G180900 Sobic005G198200--Sobic004G180900 Sobic010G077500 Sobic010G077500 Sobic005G198200--Sobic010G077500 Sobic003G122300--Sobic010G110000 Sobic004G345100 Sobic004G345100 Sobic003G122300--Sobic004G345100 Sobic004G160700 Sobic004G160700 Sobic003G122300--Sobic004G160700 Sobic001G462401 Sobic001G462401 Sobic003G122300--Sobic001G462401 Sobic002G280900 Sobic002G280900 Sobic003G122300--Sobic002G280900 Sobic004G196800 Sobic004G196800 Sobic003G122300--Sobic004G196800 Sobic001G154200 Sobic001G154200 Sobic003G122300--Sobic001G154200 Sobic003G119900 Sobic003G119900 Sobic003G122300--Sobic003G119900 Sobic002G403200 Sobic002G403200 Sobic003G122300--Sobic002G403200 Sobic010G207400 Sobic010G207400 Sobic008G179800--Sobic010G207400 Sobic008G179800--Sobic004G196800 Sobic004G250600 Sobic004G250600 Sobic008G179800--Sobic004G250600 Sobic010G118200 Sobic010G118200 Sobic008G179800--Sobic010G118200 Sobic007G023600 Sobic007G023600 Sobic008G179800--Sobic007G023600 Sobic001G170500 Sobic001G170500 Sobic008G179800--Sobic001G170500 Sobic008G156200 Sobic008G156200 Sobic008G179800--Sobic008G156200 Sobic009G253800 Sobic009G253800 Sobic008G179800--Sobic009G253800 Sobic004G038900 Sobic004G038900 Sobic008G179800--Sobic004G038900 Sobic009G069200--Sobic009G113100 Sobic009G069200--Sobic003G415100 Sobic010G038900 Sobic010G038900 Sobic009G069200--Sobic010G038900 Sobic009G069200--Sobic002G390400 Sobic009G069200--Sobic005G198200 Sobic009G069200--Sobic002G315100 Sobic009G069200--Sobic001G090300 Sobic005G160200 Sobic005G160200 Sobic009G069200--Sobic005G160200 Sobic008G045800 Sobic008G045800 Sobic009G069200--Sobic008G045800 Sobic002G354800 Sobic002G354800 Sobic002G315100--Sobic002G354800 Sobic002G315100--Sobic006G091850 Sobic002G315100--Sobic005G160200 Sobic003G055200 Sobic003G055200 Sobic002G315100--Sobic003G055200 Sobic002G230400 Sobic002G230400 Sobic002G315100--Sobic002G230400 Sobic004G014100 Sobic004G014100 Sobic002G315100--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G315100--Sobic006G143300 Sobic002G315100--Sobic009G069200 Sobic006G184200 Sobic006G184200 Sobic002G315100--Sobic006G184200 Sobic006G170700--Sobic006G091850 Sobic006G170700--Sobic001G154200 Sobic006G170700--Sobic006G184200 Sobic004G207100 Sobic004G207100 Sobic006G170700--Sobic004G207100 Sobic006G170700--Sobic005G198200 Sobic006G170700--Sobic003G415100 Sobic006G100266 Sobic006G100266 Sobic006G170700--Sobic006G100266 Sobic006G170700--Sobic009G059400 Sobic006G170700--Sobic002G315100 Sobic008G162100--Sobic009G113100 Sobic003G122800 Sobic003G122800 Sobic008G162100--Sobic003G122800 Sobic001G334100 Sobic001G334100 Sobic008G162100--Sobic001G334100 Sobic008G162100--Sobic001G004100 Sobic008G162100--Sobic001G013300 Sobic008G162100--Sobic010G110000 Sobic001G033900 Sobic001G033900 Sobic008G162100--Sobic001G033900 Sobic008G162100--Sobic002G208400 Sobic010G141600 Sobic010G141600 Sobic008G162100--Sobic010G141600
Octagon: transcription factors


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