Gene annotation
Transcriptome id Sobic.003G415100.1
Synonym Sb03g044910
Functional annotation BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5XH28
Pfam PF00651
Panther DB PTHR24412 PTHR24412:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G15840 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os01g70670.2 : BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a039205 , Zm00025a026159
Brachypodium KQK11371 , PNT73523 , PNT73524
Barley HORVU3Hr1G097580.4 , HORVU3Hr1G097580.1 , HORVU3Hr1G097580.2 , HORVU3Hr1G097580.3
Wheat TraesCS3B02G488400 , TraesCS3A02G451000 , TraesCS3D02G443900 , TraesCS3B02G488400
Populus -


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cDNA sequences
Sobic.003G415100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G346700 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.009G069200 glycine-rich protein, putative, expressed -
3 Sobic.002G390400 expressed protein -
4 Sobic.009G257500 expressed protein -
5 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.001G123201 - -
7 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
8 Sobic.006G091850 - -
9 Sobic.003G253400 expressed protein -
10 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
11 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
12 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
13 Sobic.006G250100 tRNA-specific adenosine deaminase 1, putative, expressed K15440: TAD1, tRNA-specific adenosine deaminase 1
14 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
15 Sobic.010G262900 expressed protein -
16 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
17 Sobic.005G072400 expressed protein -
18 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
19 Sobic.010G110000 asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
20 Sobic.006G170700 START domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G415100 Sobic003G415100 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic009G129600 Sobic009G129600 Sobic001G346700--Sobic009G129600 Sobic004G347100 Sobic004G347100 Sobic001G346700--Sobic004G347100 Sobic001G346700--Sobic003G415100 Sobic003G354100 Sobic003G354100 Sobic001G346700--Sobic003G354100 Sobic007G188900 Sobic007G188900 Sobic001G346700--Sobic007G188900 Sobic002G148400 Sobic002G148400 Sobic001G346700--Sobic002G148400 Sobic007G139400 Sobic007G139400 Sobic001G346700--Sobic007G139400 Sobic002G268900 Sobic002G268900 Sobic001G346700--Sobic002G268900 Sobic002G334600 Sobic002G334600 Sobic001G346700--Sobic002G334600 Sobic009G113100 Sobic009G113100 Sobic009G069200--Sobic009G113100 Sobic009G069200--Sobic003G415100 Sobic010G038900 Sobic010G038900 Sobic009G069200--Sobic010G038900 Sobic009G069200--Sobic002G390400 Sobic005G198200 Sobic005G198200 Sobic009G069200--Sobic005G198200 Sobic002G315100 Sobic002G315100 Sobic009G069200--Sobic002G315100 Sobic009G069200--Sobic001G090300 Sobic005G160200 Sobic005G160200 Sobic009G069200--Sobic005G160200 Sobic008G045800 Sobic008G045800 Sobic009G069200--Sobic008G045800 Sobic001G135500 Sobic001G135500 Sobic002G390400--Sobic001G135500 Sobic002G390400--Sobic003G415100 Sobic002G390400--Sobic009G069200 Sobic002G390400--Sobic005G198200 Sobic005G030100 Sobic005G030100 Sobic002G390400--Sobic005G030100 Sobic009G030400 Sobic009G030400 Sobic002G390400--Sobic009G030400 Sobic002G390400--Sobic009G113100 Sobic008G156200 Sobic008G156200 Sobic002G390400--Sobic008G156200 Sobic001G429200 Sobic001G429200 Sobic002G390400--Sobic001G429200 Sobic009G257500--Sobic006G126600 Sobic009G032200 Sobic009G032200 Sobic009G257500--Sobic009G032200 Sobic009G257500--Sobic008G045800 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic010G189100 Sobic010G189100 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic005G199200 Sobic005G199200 Sobic001G090300--Sobic005G199200 Sobic001G090300--Sobic009G113100 Sobic005G040900 Sobic005G040900 Sobic001G090300--Sobic005G040900 Sobic001G090300--Sobic003G415100 Sobic009G074700 Sobic009G074700 Sobic001G090300--Sobic009G074700 Sobic007G187600 Sobic007G187600 Sobic001G090300--Sobic007G187600 Sobic001G090300--Sobic009G129600 Sobic009G000400 Sobic009G000400 Sobic001G090300--Sobic009G000400 Sobic001G334100 Sobic001G334100 Sobic001G090300--Sobic001G334100 Sobic010G256200 Sobic010G256200 Sobic001G123201--Sobic010G256200 Sobic001G123201--Sobic003G415100 Sobic003G026900 Sobic003G026900 Sobic001G123201--Sobic003G026900 Sobic004G075700 Sobic004G075700 Sobic001G123201--Sobic004G075700 Sobic008G169800 Sobic008G169800 Sobic001G123201--Sobic008G169800 Sobic006G061100 Sobic006G061100 Sobic001G123201--Sobic006G061100 Sobic006G200901 Sobic006G200901 Sobic001G123201--Sobic006G200901 Sobic001G157600 Sobic001G157600 Sobic001G123201--Sobic001G157600 Sobic004G038900 Sobic004G038900 Sobic001G123201--Sobic004G038900 Sobic006G126600--Sobic009G257500 Sobic004G207000 Sobic004G207000 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic009G031500 Sobic009G031500 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic005G177900 Sobic005G177900 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600 Sobic006G170700 Sobic006G170700 Sobic006G091850--Sobic006G170700 Sobic006G091850--Sobic005G160200 Sobic006G091850--Sobic002G315100 Sobic004G207100 Sobic004G207100 Sobic006G091850--Sobic004G207100 Sobic006G091850--Sobic003G415100 Sobic001G154200 Sobic001G154200 Sobic006G091850--Sobic001G154200 Sobic001G425200 Sobic001G425200 Sobic006G091850--Sobic001G425200 Sobic006G184200 Sobic006G184200 Sobic006G091850--Sobic006G184200 Sobic009G060400 Sobic009G060400 Sobic006G091850--Sobic009G060400 Sobic010G279900 Sobic010G279900 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic001G395100 Sobic001G395100 Sobic003G253400--Sobic001G395100 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic003G253400--Sobic009G192500 Sobic003G253400--Sobic004G347100 Sobic007G183300 Sobic007G183300 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800
Octagon: transcription factors


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