Gene annotation
Transcriptome id Sobic.009G257500.1
Synonym Sb09g030720
Functional annotation expressed protein
UniProt A0A1B6PAF8
Pfam PF00855
Panther DB PTHR33697 PTHR33697:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21295 : Tudor/PWWP/MBT superfamily protein
RAP-DB (Rice) LOC_Os01g37790.1 : expressed protein
MaizeGDB (Corn) Zm00025a036814 , Zm00025a026493 , Zm00025a044737
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
2 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
3 Sobic.008G045800 PHD-finger family protein, expressed -
4 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
5 Sobic.008G056200 OsFBX238 - F-box domain containing protein, expressed -
6 Sobic.010G189100 expressed protein -
7 Sobic.010G236200 RecF/RecN/SMC N terminal domain containing protein, expressed -
8 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
9 Sobic.010G262900 expressed protein -
10 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
11 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
12 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
13 Sobic.004G207000 fasciated ear2, putative, expressed -
14 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
15 Sobic.004G111000 bromodomain containing protein, expressed -
16 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
17 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
19 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
20 Sobic.002G390400 expressed protein -


Gene co-expression network
sample Sobic009G257500 Sobic009G257500 Sobic006G126600 Sobic006G126600 Sobic009G257500--Sobic006G126600 Sobic009G032200 Sobic009G032200 Sobic009G257500--Sobic009G032200 Sobic008G045800 Sobic008G045800 Sobic009G257500--Sobic008G045800 Sobic003G415100 Sobic003G415100 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic010G189100 Sobic010G189100 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic008G156200 Sobic008G156200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic006G126600--Sobic009G257500 Sobic004G207000 Sobic004G207000 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic009G031500 Sobic009G031500 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic005G177900 Sobic005G177900 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600 Sobic009G032200--Sobic010G236200 Sobic010G233000 Sobic010G233000 Sobic009G032200--Sobic010G233000 Sobic010G269300 Sobic010G269300 Sobic009G032200--Sobic010G269300 Sobic004G043750 Sobic004G043750 Sobic009G032200--Sobic004G043750 Sobic008G057000 Sobic008G057000 Sobic009G032200--Sobic008G057000 Sobic009G032200--Sobic009G257500 Sobic003G221500 Sobic003G221500 Sobic009G032200--Sobic003G221500 Sobic010G215900 Sobic010G215900 Sobic009G032200--Sobic010G215900 Sobic001G135500 Sobic001G135500 Sobic009G032200--Sobic001G135500 Sobic001G005800 Sobic001G005800 Sobic008G045800--Sobic001G005800 Sobic008G045800--Sobic009G257500 Sobic004G014100 Sobic004G014100 Sobic008G045800--Sobic004G014100 Sobic008G045800--Sobic010G262900 Sobic010G180200 Sobic010G180200 Sobic008G045800--Sobic010G180200 Sobic006G200901 Sobic006G200901 Sobic008G045800--Sobic006G200901 Sobic002G230400 Sobic002G230400 Sobic008G045800--Sobic002G230400 Sobic008G045800--Sobic010G236200 Sobic004G075700 Sobic004G075700 Sobic008G045800--Sobic004G075700 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic008G056200--Sobic006G126600 Sobic008G056200--Sobic009G257500 Sobic008G056200--Sobic008G045800 Sobic006G250100 Sobic006G250100 Sobic008G056200--Sobic006G250100 Sobic008G056200--Sobic010G189100 Sobic002G354800 Sobic002G354800 Sobic008G056200--Sobic002G354800 Sobic001G228400 Sobic001G228400 Sobic008G056200--Sobic001G228400 Sobic008G056200--Sobic009G032200 Sobic008G056200--Sobic003G415100 Sobic003G035500 Sobic003G035500 Sobic010G189100--Sobic003G035500 Sobic003G022200 Sobic003G022200 Sobic010G189100--Sobic003G022200 Sobic001G033400 Sobic001G033400 Sobic010G189100--Sobic001G033400 Sobic010G189100--Sobic009G257500 Sobic010G189100--Sobic006G126600 Sobic007G078300 Sobic007G078300 Sobic010G189100--Sobic007G078300 Sobic010G189100--Sobic010G262900 Sobic010G189100--Sobic008G156200 Sobic002G341100 Sobic002G341100 Sobic010G189100--Sobic002G341100 Sobic010G236200--Sobic009G032200 Sobic010G236200--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic010G236200--Sobic010G149600 Sobic010G236200--Sobic004G043750 Sobic010G236200--Sobic003G221500 Sobic004G111000 Sobic004G111000 Sobic010G236200--Sobic004G111000 Sobic002G254800 Sobic002G254800 Sobic010G236200--Sobic002G254800 Sobic010G236200--Sobic009G257500 Sobic010G236200--Sobic007G125700 Sobic010G207400 Sobic010G207400 Sobic008G156200--Sobic010G207400 Sobic002G247300 Sobic002G247300 Sobic008G156200--Sobic002G247300 Sobic008G156200--Sobic003G035500 Sobic008G156200--Sobic004G075700 Sobic005G131800 Sobic005G131800 Sobic008G156200--Sobic005G131800 Sobic003G412200 Sobic003G412200 Sobic008G156200--Sobic003G412200 Sobic010G112700 Sobic010G112700 Sobic008G156200--Sobic010G112700 Sobic002G016900 Sobic002G016900 Sobic008G156200--Sobic002G016900 Sobic004G038900 Sobic004G038900 Sobic008G156200--Sobic004G038900 Sobic010G262900--Sobic003G035500 Sobic010G262900--Sobic008G045800 Sobic010G262900--Sobic003G415100 Sobic010G262900--Sobic009G257500 Sobic005G032400 Sobic005G032400 Sobic010G262900--Sobic005G032400 Sobic010G262900--Sobic008G156200 Sobic010G262900--Sobic010G189100 Sobic003G004500 Sobic003G004500 Sobic010G262900--Sobic003G004500 Sobic010G262900--Sobic001G033400
Octagon: transcription factors


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