Gene annotation
Transcriptome id Sobic.008G056200.3,Sobic.008G056200.2,Sobic.008G056200.4,Sobic.008G056200.1
Synonym Sb08g004745, DOR
Functional annotation OsFBX238 - F-box domain containing protein, expressed
UniProt A0A1B6PBN0
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G31470 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os07g35060.1,LOC_Os07g35060.2 : OsFBX238 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G056200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
2 Sobic.009G257500 expressed protein -
3 Sobic.008G045800 PHD-finger family protein, expressed -
4 Sobic.006G250100 tRNA-specific adenosine deaminase 1, putative, expressed K15440: TAD1, tRNA-specific adenosine deaminase 1
5 Sobic.010G189100 expressed protein -
6 Sobic.002G354800 zinc finger family protein, putative, expressed -
7 Sobic.001G228400 OsFBX217 - F-box domain containing protein, expressed -
8 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
9 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
10 Sobic.010G262900 expressed protein -
11 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
12 Sobic.004G207000 fasciated ear2, putative, expressed -
13 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
14 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
15 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
16 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
17 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
18 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
19 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
20 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -


Gene co-expression network
sample Sobic008G056200 Sobic008G056200 Sobic006G126600 Sobic006G126600 Sobic008G056200--Sobic006G126600 Sobic009G257500 Sobic009G257500 Sobic008G056200--Sobic009G257500 Sobic008G045800 Sobic008G045800 Sobic008G056200--Sobic008G045800 Sobic006G250100 Sobic006G250100 Sobic008G056200--Sobic006G250100 Sobic010G189100 Sobic010G189100 Sobic008G056200--Sobic010G189100 Sobic002G354800 Sobic002G354800 Sobic008G056200--Sobic002G354800 Sobic001G228400 Sobic001G228400 Sobic008G056200--Sobic001G228400 Sobic009G032200 Sobic009G032200 Sobic008G056200--Sobic009G032200 Sobic003G415100 Sobic003G415100 Sobic008G056200--Sobic003G415100 Sobic006G126600--Sobic009G257500 Sobic004G207000 Sobic004G207000 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic009G031500 Sobic009G031500 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic005G177900 Sobic005G177900 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600 Sobic009G257500--Sobic006G126600 Sobic009G257500--Sobic009G032200 Sobic009G257500--Sobic008G045800 Sobic009G257500--Sobic003G415100 Sobic009G257500--Sobic008G056200 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic008G156200 Sobic008G156200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic001G005800 Sobic001G005800 Sobic008G045800--Sobic001G005800 Sobic008G045800--Sobic009G257500 Sobic004G014100 Sobic004G014100 Sobic008G045800--Sobic004G014100 Sobic008G045800--Sobic010G262900 Sobic010G180200 Sobic010G180200 Sobic008G045800--Sobic010G180200 Sobic006G200901 Sobic006G200901 Sobic008G045800--Sobic006G200901 Sobic002G230400 Sobic002G230400 Sobic008G045800--Sobic002G230400 Sobic008G045800--Sobic010G236200 Sobic004G075700 Sobic004G075700 Sobic008G045800--Sobic004G075700 Sobic006G250100--Sobic003G415100 Sobic001G090300 Sobic001G090300 Sobic006G250100--Sobic001G090300 Sobic006G250100--Sobic008G056200 Sobic003G244700 Sobic003G244700 Sobic006G250100--Sobic003G244700 Sobic009G069200 Sobic009G069200 Sobic006G250100--Sobic009G069200 Sobic006G250100--Sobic006G126600 Sobic003G412100 Sobic003G412100 Sobic006G250100--Sobic003G412100 Sobic001G522400 Sobic001G522400 Sobic006G250100--Sobic001G522400 Sobic006G250100--Sobic001G228400 Sobic003G035500 Sobic003G035500 Sobic010G189100--Sobic003G035500 Sobic003G022200 Sobic003G022200 Sobic010G189100--Sobic003G022200 Sobic001G033400 Sobic001G033400 Sobic010G189100--Sobic001G033400 Sobic010G189100--Sobic009G257500 Sobic010G189100--Sobic006G126600 Sobic007G078300 Sobic007G078300 Sobic010G189100--Sobic007G078300 Sobic010G189100--Sobic010G262900 Sobic010G189100--Sobic008G156200 Sobic002G341100 Sobic002G341100 Sobic010G189100--Sobic002G341100 Sobic002G354800--Sobic002G230400 Sobic002G315100 Sobic002G315100 Sobic002G354800--Sobic002G315100 Sobic006G184200 Sobic006G184200 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic002G354800--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G354800--Sobic006G143300 Sobic003G055200 Sobic003G055200 Sobic002G354800--Sobic003G055200 Sobic001G278700 Sobic001G278700 Sobic002G354800--Sobic001G278700 Sobic001G384600 Sobic001G384600 Sobic001G228400--Sobic001G384600 Sobic001G228400--Sobic005G177900 Sobic001G228400--Sobic006G126600 Sobic001G228400--Sobic002G341100 Sobic001G228400--Sobic010G262900 Sobic001G228400--Sobic008G056200 Sobic001G228400--Sobic006G250100 Sobic003G014900 Sobic003G014900 Sobic001G228400--Sobic003G014900 Sobic001G228400--Sobic003G035500 Sobic009G032200--Sobic010G236200 Sobic010G233000 Sobic010G233000 Sobic009G032200--Sobic010G233000 Sobic010G269300 Sobic010G269300 Sobic009G032200--Sobic010G269300 Sobic004G043750 Sobic004G043750 Sobic009G032200--Sobic004G043750 Sobic008G057000 Sobic008G057000 Sobic009G032200--Sobic008G057000 Sobic009G032200--Sobic009G257500 Sobic003G221500 Sobic003G221500 Sobic009G032200--Sobic003G221500 Sobic010G215900 Sobic010G215900 Sobic009G032200--Sobic010G215900 Sobic001G135500 Sobic001G135500 Sobic009G032200--Sobic001G135500 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic003G415100--Sobic009G257500 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400
Octagon: transcription factors


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