Gene annotation
Transcriptome id Sobic.001G228400.5,Sobic.001G228400.2,Sobic.001G228400.3,Sobic.001G228400.4,Sobic.001G228400.6
Synonym Sb01g020050
Functional annotation OsFBX217 - F-box domain containing protein, expressed
UniProt A0A1Z5S7H3 , A0A1Z5S6X7 , A0A1Z5S6Z5 , A0A1Z5S6X0 , A0A1Z5S6X3
Pfam -
Panther DB PTHR20995 PTHR20995:SF18 PTHR22844 PTHR22844:SF163
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g07520.1 : OsFBX217 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017689
Brachypodium KQJ96973 , PNT67499
Barley -
Wheat TraesCS1B02G162000 , TraesCS1B02G162000 , TraesCS1D02G143800 , TraesCS1A02G144700 , TraesCS1A02G144700 , TraesCS1D02G143800
Populus -


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cDNA sequences
Sobic.001G228400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
2 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
3 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
4 Sobic.002G341100 bromodomain domain containing protein, expressed -
5 Sobic.010G262900 expressed protein -
6 Sobic.008G056200 OsFBX238 - F-box domain containing protein, expressed -
7 Sobic.006G250100 tRNA-specific adenosine deaminase 1, putative, expressed K15440: TAD1, tRNA-specific adenosine deaminase 1
8 Sobic.003G014900 expressed protein -
9 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
10 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
11 Sobic.008G044600 expressed protein -
12 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
13 Sobic.009G257500 expressed protein -
14 Sobic.004G148600 ankyrin, putative, expressed -
15 Sobic.004G207000 fasciated ear2, putative, expressed -
16 Sobic.008G045800 PHD-finger family protein, expressed -
17 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
18 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
20 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G228400 Sobic001G228400 Sobic001G384600 Sobic001G384600 Sobic001G228400--Sobic001G384600 Sobic005G177900 Sobic005G177900 Sobic001G228400--Sobic005G177900 Sobic006G126600 Sobic006G126600 Sobic001G228400--Sobic006G126600 Sobic002G341100 Sobic002G341100 Sobic001G228400--Sobic002G341100 Sobic010G262900 Sobic010G262900 Sobic001G228400--Sobic010G262900 Sobic008G056200 Sobic008G056200 Sobic001G228400--Sobic008G056200 Sobic006G250100 Sobic006G250100 Sobic001G228400--Sobic006G250100 Sobic003G014900 Sobic003G014900 Sobic001G228400--Sobic003G014900 Sobic003G035500 Sobic003G035500 Sobic001G228400--Sobic003G035500 Sobic001G384600--Sobic005G177900 Sobic006G022500 Sobic006G022500 Sobic001G384600--Sobic006G022500 Sobic004G148600 Sobic004G148600 Sobic001G384600--Sobic004G148600 Sobic001G384600--Sobic001G228400 Sobic009G194700 Sobic009G194700 Sobic001G384600--Sobic009G194700 Sobic003G244700 Sobic003G244700 Sobic001G384600--Sobic003G244700 Sobic001G384600--Sobic006G126600 Sobic006G022400 Sobic006G022400 Sobic001G384600--Sobic006G022400 Sobic004G052800 Sobic004G052800 Sobic001G384600--Sobic004G052800 Sobic005G177900--Sobic001G384600 Sobic005G177900--Sobic006G022400 Sobic005G177900--Sobic004G052800 Sobic005G177900--Sobic006G022500 Sobic004G207000 Sobic004G207000 Sobic005G177900--Sobic004G207000 Sobic005G177900--Sobic001G228400 Sobic005G177900--Sobic006G126600 Sobic004G189700 Sobic004G189700 Sobic005G177900--Sobic004G189700 Sobic002G223300 Sobic002G223300 Sobic005G177900--Sobic002G223300 Sobic009G257500 Sobic009G257500 Sobic006G126600--Sobic009G257500 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic009G031500 Sobic009G031500 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic003G415100 Sobic003G415100 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic001G041400 Sobic001G041400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G095700 Sobic002G095700 Sobic002G341100--Sobic002G095700 Sobic002G067800 Sobic002G067800 Sobic002G341100--Sobic002G067800 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic004G256200 Sobic004G256200 Sobic002G341100--Sobic004G256200 Sobic006G120400 Sobic006G120400 Sobic002G341100--Sobic006G120400 Sobic010G262900--Sobic003G035500 Sobic008G045800 Sobic008G045800 Sobic010G262900--Sobic008G045800 Sobic010G262900--Sobic003G415100 Sobic010G262900--Sobic009G257500 Sobic005G032400 Sobic005G032400 Sobic010G262900--Sobic005G032400 Sobic008G156200 Sobic008G156200 Sobic010G262900--Sobic008G156200 Sobic010G189100 Sobic010G189100 Sobic010G262900--Sobic010G189100 Sobic003G004500 Sobic003G004500 Sobic010G262900--Sobic003G004500 Sobic010G262900--Sobic001G033400 Sobic008G056200--Sobic006G126600 Sobic008G056200--Sobic009G257500 Sobic008G056200--Sobic008G045800 Sobic008G056200--Sobic006G250100 Sobic008G056200--Sobic010G189100 Sobic002G354800 Sobic002G354800 Sobic008G056200--Sobic002G354800 Sobic008G056200--Sobic001G228400 Sobic009G032200 Sobic009G032200 Sobic008G056200--Sobic009G032200 Sobic008G056200--Sobic003G415100 Sobic006G250100--Sobic003G415100 Sobic001G090300 Sobic001G090300 Sobic006G250100--Sobic001G090300 Sobic006G250100--Sobic008G056200 Sobic006G250100--Sobic003G244700 Sobic009G069200 Sobic009G069200 Sobic006G250100--Sobic009G069200 Sobic006G250100--Sobic006G126600 Sobic003G412100 Sobic003G412100 Sobic006G250100--Sobic003G412100 Sobic001G522400 Sobic001G522400 Sobic006G250100--Sobic001G522400 Sobic006G250100--Sobic001G228400 Sobic003G014900--Sobic001G384600 Sobic003G014900--Sobic001G228400 Sobic003G014900--Sobic004G207000 Sobic003G014900--Sobic009G031500 Sobic003G014900--Sobic006G126600 Sobic002G053200 Sobic002G053200 Sobic003G014900--Sobic002G053200 Sobic003G014900--Sobic005G177900 Sobic010G170900 Sobic010G170900 Sobic003G014900--Sobic010G170900 Sobic001G393401 Sobic001G393401 Sobic003G014900--Sobic001G393401 Sobic003G035500--Sobic001G033400 Sobic003G035500--Sobic008G156200 Sobic007G078300 Sobic007G078300 Sobic003G035500--Sobic007G078300 Sobic003G035500--Sobic010G189100 Sobic002G247300 Sobic002G247300 Sobic003G035500--Sobic002G247300 Sobic010G207400 Sobic010G207400 Sobic003G035500--Sobic010G207400 Sobic003G174200 Sobic003G174200 Sobic003G035500--Sobic003G174200 Sobic003G412200 Sobic003G412200 Sobic003G035500--Sobic003G412200 Sobic007G091200 Sobic007G091200 Sobic003G035500--Sobic007G091200
Octagon: transcription factors


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