Gene annotation
Transcriptome id Sobic.003G014900.5,Sobic.003G014900.8,Sobic.003G014900.6,Sobic.003G014900.4,Sobic.003G014900.7
Synonym Sb03g001480
Functional annotation expressed protein
UniProt C5XKE1
Pfam -
Panther DB PTHR34380 PTHR34380:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53220 : -
RAP-DB (Rice) LOC_Os01g12180.1 : expressed protein
MaizeGDB (Corn) Zm00025a022881
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
2 Sobic.001G228400 OsFBX217 - F-box domain containing protein, expressed -
3 Sobic.004G207000 fasciated ear2, putative, expressed -
4 Sobic.009G031500 agenet domain containing protein, putative, expressed -
5 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
6 Sobic.002G053200 RNA recognition motif containing protein, expressed -
7 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
8 Sobic.010G170900 expressed protein -
9 Sobic.001G393401 - -
10 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
11 Sobic.009G190200 transcription elongation factor SPT5 homolog 1, putative, expressed -
12 Sobic.007G197100 expressed protein -
13 Sobic.003G282700 protein kri1, putative, expressed K14786: protein KRI1
14 Sobic.009G216500 expressed protein -
15 Sobic.001G065300 GRF zinc finger family protein, expressed -
16 Sobic.002G003000 expressed protein -
17 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
18 Sobic.005G022700 OsFBX369 - F-box domain containing protein, expressed -
19 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
20 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G014900 Sobic003G014900 Sobic001G384600 Sobic001G384600 Sobic003G014900--Sobic001G384600 Sobic001G228400 Sobic001G228400 Sobic003G014900--Sobic001G228400 Sobic004G207000 Sobic004G207000 Sobic003G014900--Sobic004G207000 Sobic009G031500 Sobic009G031500 Sobic003G014900--Sobic009G031500 Sobic006G126600 Sobic006G126600 Sobic003G014900--Sobic006G126600 Sobic002G053200 Sobic002G053200 Sobic003G014900--Sobic002G053200 Sobic005G177900 Sobic005G177900 Sobic003G014900--Sobic005G177900 Sobic010G170900 Sobic010G170900 Sobic003G014900--Sobic010G170900 Sobic001G393401 Sobic001G393401 Sobic003G014900--Sobic001G393401 Sobic001G384600--Sobic005G177900 Sobic006G022500 Sobic006G022500 Sobic001G384600--Sobic006G022500 Sobic004G148600 Sobic004G148600 Sobic001G384600--Sobic004G148600 Sobic001G384600--Sobic001G228400 Sobic009G194700 Sobic009G194700 Sobic001G384600--Sobic009G194700 Sobic003G244700 Sobic003G244700 Sobic001G384600--Sobic003G244700 Sobic001G384600--Sobic006G126600 Sobic006G022400 Sobic006G022400 Sobic001G384600--Sobic006G022400 Sobic004G052800 Sobic004G052800 Sobic001G384600--Sobic004G052800 Sobic001G228400--Sobic001G384600 Sobic001G228400--Sobic005G177900 Sobic001G228400--Sobic006G126600 Sobic002G341100 Sobic002G341100 Sobic001G228400--Sobic002G341100 Sobic010G262900 Sobic010G262900 Sobic001G228400--Sobic010G262900 Sobic008G056200 Sobic008G056200 Sobic001G228400--Sobic008G056200 Sobic006G250100 Sobic006G250100 Sobic001G228400--Sobic006G250100 Sobic001G228400--Sobic003G014900 Sobic003G035500 Sobic003G035500 Sobic001G228400--Sobic003G035500 Sobic004G207000--Sobic006G022400 Sobic001G540700 Sobic001G540700 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic005G032600 Sobic005G032600 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic004G207000--Sobic009G031500 Sobic009G031500--Sobic004G207000 Sobic009G031500--Sobic001G540700 Sobic009G031500--Sobic006G126600 Sobic009G031500--Sobic007G125700 Sobic001G487200 Sobic001G487200 Sobic009G031500--Sobic001G487200 Sobic003G274400 Sobic003G274400 Sobic009G031500--Sobic003G274400 Sobic003G077500 Sobic003G077500 Sobic009G031500--Sobic003G077500 Sobic004G206300 Sobic004G206300 Sobic009G031500--Sobic004G206300 Sobic003G027800 Sobic003G027800 Sobic009G031500--Sobic003G027800 Sobic009G257500 Sobic009G257500 Sobic006G126600--Sobic009G257500 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic003G415100 Sobic003G415100 Sobic006G126600--Sobic003G415100 Sobic006G126600--Sobic007G125700 Sobic006G126600--Sobic005G177900 Sobic006G126600--Sobic002G302600 Sobic005G114101 Sobic005G114101 Sobic002G053200--Sobic005G114101 Sobic002G053200--Sobic003G014900 Sobic007G053700 Sobic007G053700 Sobic002G053200--Sobic007G053700 Sobic003G282700 Sobic003G282700 Sobic002G053200--Sobic003G282700 Sobic001G261585 Sobic001G261585 Sobic002G053200--Sobic001G261585 Sobic009G083400 Sobic009G083400 Sobic002G053200--Sobic009G083400 Sobic002G053200--Sobic001G393401 Sobic010G087000 Sobic010G087000 Sobic002G053200--Sobic010G087000 Sobic002G154400 Sobic002G154400 Sobic002G053200--Sobic002G154400 Sobic005G177900--Sobic001G384600 Sobic005G177900--Sobic006G022400 Sobic005G177900--Sobic004G052800 Sobic005G177900--Sobic006G022500 Sobic005G177900--Sobic004G207000 Sobic005G177900--Sobic001G228400 Sobic005G177900--Sobic006G126600 Sobic004G189700 Sobic004G189700 Sobic005G177900--Sobic004G189700 Sobic002G223300 Sobic002G223300 Sobic005G177900--Sobic002G223300 Sobic009G253400 Sobic009G253400 Sobic010G170900--Sobic009G253400 Sobic001G136500 Sobic001G136500 Sobic010G170900--Sobic001G136500 Sobic010G170900--Sobic003G014900 Sobic005G007700 Sobic005G007700 Sobic010G170900--Sobic005G007700 Sobic004G129600 Sobic004G129600 Sobic010G170900--Sobic004G129600 Sobic009G056300 Sobic009G056300 Sobic010G170900--Sobic009G056300 Sobic010G197800 Sobic010G197800 Sobic010G170900--Sobic010G197800 Sobic005G229000 Sobic005G229000 Sobic010G170900--Sobic005G229000 Sobic010G170900--Sobic009G031500 Sobic003G023400 Sobic003G023400 Sobic001G393401--Sobic003G023400 Sobic001G384700 Sobic001G384700 Sobic001G393401--Sobic001G384700 Sobic002G216600 Sobic002G216600 Sobic001G393401--Sobic002G216600 Sobic002G060450 Sobic002G060450 Sobic001G393401--Sobic002G060450 Sobic010G190400 Sobic010G190400 Sobic001G393401--Sobic010G190400 Sobic005G204100 Sobic005G204100 Sobic001G393401--Sobic005G204100 Sobic001G184400 Sobic001G184400 Sobic001G393401--Sobic001G184400 Sobic002G049000 Sobic002G049000 Sobic001G393401--Sobic002G049000 Sobic001G393401--Sobic004G052800
Octagon: transcription factors


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