Gene annotation
Transcriptome id Sobic.005G022700.1
Synonym Sb05g001915
Functional annotation OsFBX369 - F-box domain containing protein, expressed
UniProt C5Y400
Pfam -
Panther DB PTHR32133:SF137 PTHR32133
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os02g15160.1 : OsFBX40 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G022700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
2 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
3 Sobic.004G020900 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
4 Sobic.001G228400 OsFBX217 - F-box domain containing protein, expressed -
5 Sobic.002G018100 - -
6 Sobic.003G014900 expressed protein -
7 Sobic.002G060450 - -
8 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
9 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.003G092066 - -
11 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.006G250100 tRNA-specific adenosine deaminase 1, putative, expressed K15440: TAD1, tRNA-specific adenosine deaminase 1
13 Sobic.001G346700 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
15 Sobic.001G384600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
16 Sobic.001G522400 FHA domain containing protein, putative, expressed -
17 Sobic.005G030400 cytochrome P450, putative, expressed K09588: CYP90A1, cytochrome P450 family 90 subfamily A polypeptide 1
18 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
19 Sobic.010G237650 - -
20 Sobic.009G069200 glycine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic005G022700 Sobic005G022700 Sobic006G022500 Sobic006G022500 Sobic005G022700--Sobic006G022500 Sobic004G189700 Sobic004G189700 Sobic005G022700--Sobic004G189700 Sobic004G020900 Sobic004G020900 Sobic005G022700--Sobic004G020900 Sobic001G228400 Sobic001G228400 Sobic005G022700--Sobic001G228400 Sobic002G018100 Sobic002G018100 Sobic005G022700--Sobic002G018100 Sobic003G014900 Sobic003G014900 Sobic005G022700--Sobic003G014900 Sobic002G060450 Sobic002G060450 Sobic005G022700--Sobic002G060450 Sobic006G126600 Sobic006G126600 Sobic005G022700--Sobic006G126600 Sobic007G046900 Sobic007G046900 Sobic005G022700--Sobic007G046900 Sobic004G227500 Sobic004G227500 Sobic006G022500--Sobic004G227500 Sobic004G148600 Sobic004G148600 Sobic006G022500--Sobic004G148600 Sobic001G384600 Sobic001G384600 Sobic006G022500--Sobic001G384600 Sobic002G073300 Sobic002G073300 Sobic006G022500--Sobic002G073300 Sobic006G022500--Sobic002G060450 Sobic006G022500--Sobic004G189700 Sobic001G045700 Sobic001G045700 Sobic006G022500--Sobic001G045700 Sobic006G022400 Sobic006G022400 Sobic006G022500--Sobic006G022400 Sobic005G177900 Sobic005G177900 Sobic006G022500--Sobic005G177900 Sobic004G189700--Sobic006G022500 Sobic004G189700--Sobic006G022400 Sobic008G090300 Sobic008G090300 Sobic004G189700--Sobic008G090300 Sobic004G189700--Sobic005G177900 Sobic003G397100 Sobic003G397100 Sobic004G189700--Sobic003G397100 Sobic002G268900 Sobic002G268900 Sobic004G189700--Sobic002G268900 Sobic003G077500 Sobic003G077500 Sobic004G189700--Sobic003G077500 Sobic001G499200 Sobic001G499200 Sobic004G189700--Sobic001G499200 Sobic001G065300 Sobic001G065300 Sobic004G189700--Sobic001G065300 Sobic007G039300 Sobic007G039300 Sobic004G020900--Sobic007G039300 Sobic004G043750 Sobic004G043750 Sobic004G020900--Sobic004G043750 Sobic008G017900 Sobic008G017900 Sobic004G020900--Sobic008G017900 Sobic009G032200 Sobic009G032200 Sobic004G020900--Sobic009G032200 Sobic010G269300 Sobic010G269300 Sobic004G020900--Sobic010G269300 Sobic009G122800 Sobic009G122800 Sobic004G020900--Sobic009G122800 Sobic002G263700 Sobic002G263700 Sobic004G020900--Sobic002G263700 Sobic010G233000 Sobic010G233000 Sobic004G020900--Sobic010G233000 Sobic002G154400 Sobic002G154400 Sobic004G020900--Sobic002G154400 Sobic001G228400--Sobic001G384600 Sobic001G228400--Sobic005G177900 Sobic001G228400--Sobic006G126600 Sobic002G341100 Sobic002G341100 Sobic001G228400--Sobic002G341100 Sobic010G262900 Sobic010G262900 Sobic001G228400--Sobic010G262900 Sobic008G056200 Sobic008G056200 Sobic001G228400--Sobic008G056200 Sobic006G250100 Sobic006G250100 Sobic001G228400--Sobic006G250100 Sobic001G228400--Sobic003G014900 Sobic003G035500 Sobic003G035500 Sobic001G228400--Sobic003G035500 Sobic004G045566 Sobic004G045566 Sobic002G018100--Sobic004G045566 Sobic001G265200 Sobic001G265200 Sobic002G018100--Sobic001G265200 Sobic006G123900 Sobic006G123900 Sobic002G018100--Sobic006G123900 Sobic005G077400 Sobic005G077400 Sobic002G018100--Sobic005G077400 Sobic001G228700 Sobic001G228700 Sobic002G018100--Sobic001G228700 Sobic002G330400 Sobic002G330400 Sobic002G018100--Sobic002G330400 Sobic005G128000 Sobic005G128000 Sobic002G018100--Sobic005G128000 Sobic006G039900 Sobic006G039900 Sobic002G018100--Sobic006G039900 Sobic005G099150 Sobic005G099150 Sobic002G018100--Sobic005G099150 Sobic003G014900--Sobic001G384600 Sobic003G014900--Sobic001G228400 Sobic004G207000 Sobic004G207000 Sobic003G014900--Sobic004G207000 Sobic009G031500 Sobic009G031500 Sobic003G014900--Sobic009G031500 Sobic003G014900--Sobic006G126600 Sobic002G053200 Sobic002G053200 Sobic003G014900--Sobic002G053200 Sobic003G014900--Sobic005G177900 Sobic010G170900 Sobic010G170900 Sobic003G014900--Sobic010G170900 Sobic001G393401 Sobic001G393401 Sobic003G014900--Sobic001G393401 Sobic003G185250 Sobic003G185250 Sobic002G060450--Sobic003G185250 Sobic002G049000 Sobic002G049000 Sobic002G060450--Sobic002G049000 Sobic002G060450--Sobic007G046900 Sobic006G210200 Sobic006G210200 Sobic002G060450--Sobic006G210200 Sobic006G006500 Sobic006G006500 Sobic002G060450--Sobic006G006500 Sobic002G060450--Sobic001G045700 Sobic002G050500 Sobic002G050500 Sobic002G060450--Sobic002G050500 Sobic002G060450--Sobic006G022500 Sobic003G346000 Sobic003G346000 Sobic002G060450--Sobic003G346000 Sobic009G257500 Sobic009G257500 Sobic006G126600--Sobic009G257500 Sobic006G126600--Sobic004G207000 Sobic006G126600--Sobic008G056200 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic003G415100 Sobic003G415100 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600 Sobic004G078100 Sobic004G078100 Sobic007G046900--Sobic004G078100 Sobic007G046900--Sobic002G060450 Sobic002G223300 Sobic002G223300 Sobic007G046900--Sobic002G223300 Sobic002G018600 Sobic002G018600 Sobic007G046900--Sobic002G018600 Sobic001G215400 Sobic001G215400 Sobic007G046900--Sobic001G215400 Sobic002G095700 Sobic002G095700 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic002G089900 Sobic002G089900 Sobic007G046900--Sobic002G089900 Sobic003G433500 Sobic003G433500 Sobic007G046900--Sobic003G433500
Octagon: transcription factors


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