Gene annotation
Transcriptome id Sobic.005G030400.2
Synonym DWF3, CYP90A, CYP90A1, CPD, CYP90, CBB3, Sb05g002580
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1Z5RHE5
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF44
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K09588; CYP90A1, cytochrome P450 family 90 subfamily A polypeptide 1
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G05690 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os12g04480.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a033444 , Zm00025a013074
Brachypodium KQJ92356
Barley HORVU5Hr1G043140.5 , HORVU5Hr1G043140.4 , HORVU5Hr1G043140.2 , HORVU5Hr1G043140.1 , HORVU5Hr1G043140.3
Wheat TraesCS5A02G131400 , TraesCS5A02G131400 , TraesCS5D02G139900 , TraesCS5D02G139900 , TraesCS5B02G133400
Populus -


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cDNA sequences
Sobic.005G030400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G037300 membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.001G522400 FHA domain containing protein, putative, expressed -
3 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
4 Sobic.002G201000 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
6 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
7 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.006G006500 MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
10 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
11 Sobic.002G060450 - -
12 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
13 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -
14 Sobic.002G060600 OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
16 Sobic.006G276000 CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
17 Sobic.007G227000 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
18 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
19 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
20 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic005G030400 Sobic005G030400 Sobic006G037300 Sobic006G037300 Sobic005G030400--Sobic006G037300 Sobic001G522400 Sobic001G522400 Sobic005G030400--Sobic001G522400 Sobic007G000400 Sobic007G000400 Sobic005G030400--Sobic007G000400 Sobic002G201000 Sobic002G201000 Sobic005G030400--Sobic002G201000 Sobic006G022500 Sobic006G022500 Sobic005G030400--Sobic006G022500 Sobic004G189700 Sobic004G189700 Sobic005G030400--Sobic004G189700 Sobic007G046900 Sobic007G046900 Sobic005G030400--Sobic007G046900 Sobic006G006500 Sobic006G006500 Sobic005G030400--Sobic006G006500 Sobic006G126600 Sobic006G126600 Sobic005G030400--Sobic006G126600 Sobic006G037300--Sobic002G201000 Sobic006G037300--Sobic005G030400 Sobic009G034500 Sobic009G034500 Sobic006G037300--Sobic009G034500 Sobic001G130700 Sobic001G130700 Sobic006G037300--Sobic001G130700 Sobic003G022200 Sobic003G022200 Sobic006G037300--Sobic003G022200 Sobic001G482300 Sobic001G482300 Sobic006G037300--Sobic001G482300 Sobic001G306700 Sobic001G306700 Sobic006G037300--Sobic001G306700 Sobic006G037300--Sobic007G000400 Sobic006G003951 Sobic006G003951 Sobic006G037300--Sobic006G003951 Sobic002G268900 Sobic002G268900 Sobic001G522400--Sobic002G268900 Sobic004G085300 Sobic004G085300 Sobic001G522400--Sobic004G085300 Sobic001G448100 Sobic001G448100 Sobic001G522400--Sobic001G448100 Sobic009G129600 Sobic009G129600 Sobic001G522400--Sobic009G129600 Sobic009G000400 Sobic009G000400 Sobic001G522400--Sobic009G000400 Sobic002G079100 Sobic002G079100 Sobic001G522400--Sobic002G079100 Sobic006G210200 Sobic006G210200 Sobic001G522400--Sobic006G210200 Sobic001G090300 Sobic001G090300 Sobic001G522400--Sobic001G090300 Sobic001G522400--Sobic007G000400 Sobic008G056900 Sobic008G056900 Sobic007G000400--Sobic008G056900 Sobic007G000400--Sobic001G522400 Sobic006G242401 Sobic006G242401 Sobic007G000400--Sobic006G242401 Sobic001G045700 Sobic001G045700 Sobic007G000400--Sobic001G045700 Sobic009G096100 Sobic009G096100 Sobic007G000400--Sobic009G096100 Sobic002G380100 Sobic002G380100 Sobic007G000400--Sobic002G380100 Sobic004G128200 Sobic004G128200 Sobic007G000400--Sobic004G128200 Sobic003G163100 Sobic003G163100 Sobic007G000400--Sobic003G163100 Sobic010G143200 Sobic010G143200 Sobic007G000400--Sobic010G143200 Sobic002G201000--Sobic006G037300 Sobic002G201000--Sobic005G030400 Sobic002G201000--Sobic009G034500 Sobic002G060450 Sobic002G060450 Sobic002G201000--Sobic002G060450 Sobic002G201000--Sobic001G482300 Sobic002G201000--Sobic006G210200 Sobic002G201000--Sobic003G163100 Sobic003G185250 Sobic003G185250 Sobic002G201000--Sobic003G185250 Sobic002G201000--Sobic001G045700 Sobic004G227500 Sobic004G227500 Sobic006G022500--Sobic004G227500 Sobic004G148600 Sobic004G148600 Sobic006G022500--Sobic004G148600 Sobic001G384600 Sobic001G384600 Sobic006G022500--Sobic001G384600 Sobic002G073300 Sobic002G073300 Sobic006G022500--Sobic002G073300 Sobic006G022500--Sobic002G060450 Sobic006G022500--Sobic004G189700 Sobic006G022500--Sobic001G045700 Sobic006G022400 Sobic006G022400 Sobic006G022500--Sobic006G022400 Sobic005G177900 Sobic005G177900 Sobic006G022500--Sobic005G177900 Sobic004G189700--Sobic006G022500 Sobic004G189700--Sobic006G022400 Sobic008G090300 Sobic008G090300 Sobic004G189700--Sobic008G090300 Sobic004G189700--Sobic005G177900 Sobic003G397100 Sobic003G397100 Sobic004G189700--Sobic003G397100 Sobic004G189700--Sobic002G268900 Sobic003G077500 Sobic003G077500 Sobic004G189700--Sobic003G077500 Sobic001G499200 Sobic001G499200 Sobic004G189700--Sobic001G499200 Sobic001G065300 Sobic001G065300 Sobic004G189700--Sobic001G065300 Sobic004G078100 Sobic004G078100 Sobic007G046900--Sobic004G078100 Sobic007G046900--Sobic002G060450 Sobic002G223300 Sobic002G223300 Sobic007G046900--Sobic002G223300 Sobic002G018600 Sobic002G018600 Sobic007G046900--Sobic002G018600 Sobic001G215400 Sobic001G215400 Sobic007G046900--Sobic001G215400 Sobic002G095700 Sobic002G095700 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic002G089900 Sobic002G089900 Sobic007G046900--Sobic002G089900 Sobic003G433500 Sobic003G433500 Sobic007G046900--Sobic003G433500 Sobic006G006500--Sobic001G045700 Sobic006G006500--Sobic002G060450 Sobic006G006500--Sobic003G185250 Sobic001G261521 Sobic001G261521 Sobic006G006500--Sobic001G261521 Sobic001G303675 Sobic001G303675 Sobic006G006500--Sobic001G303675 Sobic002G049000 Sobic002G049000 Sobic006G006500--Sobic002G049000 Sobic007G079200 Sobic007G079200 Sobic006G006500--Sobic007G079200 Sobic001G454301 Sobic001G454301 Sobic006G006500--Sobic001G454301 Sobic002G061400 Sobic002G061400 Sobic006G006500--Sobic002G061400 Sobic009G257500 Sobic009G257500 Sobic006G126600--Sobic009G257500 Sobic004G207000 Sobic004G207000 Sobic006G126600--Sobic004G207000 Sobic008G056200 Sobic008G056200 Sobic006G126600--Sobic008G056200 Sobic009G031500 Sobic009G031500 Sobic006G126600--Sobic009G031500 Sobic009G192500 Sobic009G192500 Sobic006G126600--Sobic009G192500 Sobic003G415100 Sobic003G415100 Sobic006G126600--Sobic003G415100 Sobic007G125700 Sobic007G125700 Sobic006G126600--Sobic007G125700 Sobic006G126600--Sobic005G177900 Sobic002G302600 Sobic002G302600 Sobic006G126600--Sobic002G302600
Octagon: transcription factors


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