Gene annotation
Transcriptome id Sobic.006G276000.1
Synonym
Functional annotation CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5YB07
Pfam PF06293
Panther DB PTHR24348 PTHR24348:SF24
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K08269; ULK2, serine/threonine-protein kinase ULK2
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G49180 : protein kinase family protein
RAP-DB (Rice) LOC_Os04g58990.1 : CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a057475
Brachypodium KQJ85418
Barley HORVU2Hr1G124370.11 , HORVU2Hr1G124370.10 , HORVU2Hr1G124370.16 , HORVU2Hr1G124370.15 , HORVU2Hr1G124370.14 , HORVU2Hr1G124370.19 , HORVU2Hr1G124370.18 , HORVU2Hr1G124370.20 , HORVU2Hr1G124370.7 , HORVU2Hr1G124370.4 , HORVU2Hr1G124370.9 , HORVU2Hr1G124370.8
Wheat TraesCS2B02G610000 , TraesCS2A02G577400 , TraesCS2D02G588600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
2 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
3 Sobic.002G389800 expressed protein K14440: SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
4 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
5 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
6 Sobic.007G041300 expressed protein -
7 Sobic.006G248500 expressed protein -
8 Sobic.003G253400 expressed protein -
9 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
10 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
11 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
12 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
13 Sobic.006G120800 transglutaminase, putative, expressed -
14 Sobic.007G102700 - -
15 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
16 Sobic.007G026000 ATBET9, putative, expressed -
17 Sobic.006G051900 expressed protein -
18 Sobic.003G427100 WD domain, G-beta repeat domain containing protein, expressed K15542: polyadenylation factor subunit 2
19 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
20 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic006G276000 Sobic006G276000 Sobic005G046900 Sobic005G046900 Sobic006G276000--Sobic005G046900 Sobic002G262700 Sobic002G262700 Sobic006G276000--Sobic002G262700 Sobic002G389800 Sobic002G389800 Sobic006G276000--Sobic002G389800 Sobic007G191700 Sobic007G191700 Sobic006G276000--Sobic007G191700 Sobic006G278200 Sobic006G278200 Sobic006G276000--Sobic006G278200 Sobic007G041300 Sobic007G041300 Sobic006G276000--Sobic007G041300 Sobic006G248500 Sobic006G248500 Sobic006G276000--Sobic006G248500 Sobic003G253400 Sobic003G253400 Sobic006G276000--Sobic003G253400 Sobic002G095700 Sobic002G095700 Sobic006G276000--Sobic002G095700 Sobic005G046900--Sobic006G276000 Sobic005G046900--Sobic007G041300 Sobic005G079800 Sobic005G079800 Sobic005G046900--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic006G120800 Sobic006G120800 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G191700 Sobic005G191700 Sobic005G046900--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic005G046900--Sobic003G409200 Sobic007G111100 Sobic007G111100 Sobic002G262700--Sobic007G111100 Sobic010G202600 Sobic010G202600 Sobic002G262700--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic002G262700--Sobic009G074700 Sobic007G119200 Sobic007G119200 Sobic002G262700--Sobic007G119200 Sobic007G046200 Sobic007G046200 Sobic002G262700--Sobic007G046200 Sobic004G068500 Sobic004G068500 Sobic002G262700--Sobic004G068500 Sobic008G127400 Sobic008G127400 Sobic002G262700--Sobic008G127400 Sobic007G026000 Sobic007G026000 Sobic002G262700--Sobic007G026000 Sobic010G055800 Sobic010G055800 Sobic002G262700--Sobic010G055800 Sobic005G114400 Sobic005G114400 Sobic002G389800--Sobic005G114400 Sobic003G289400 Sobic003G289400 Sobic002G389800--Sobic003G289400 Sobic006G013500 Sobic006G013500 Sobic002G389800--Sobic006G013500 Sobic002G389800--Sobic009G074700 Sobic002G389800--Sobic007G026000 Sobic007G146900 Sobic007G146900 Sobic002G389800--Sobic007G146900 Sobic002G389800--Sobic010G202600 Sobic002G389800--Sobic006G276000 Sobic010G245000 Sobic010G245000 Sobic002G389800--Sobic010G245000 Sobic010G237900 Sobic010G237900 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic004G129300 Sobic004G129300 Sobic007G191700--Sobic004G129300 Sobic001G395100 Sobic001G395100 Sobic007G191700--Sobic001G395100 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic006G278200--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic006G278200--Sobic008G073000 Sobic005G072400 Sobic005G072400 Sobic006G278200--Sobic005G072400 Sobic005G030300 Sobic005G030300 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic009G137900 Sobic009G137900 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic002G067800 Sobic002G067800 Sobic006G278200--Sobic002G067800 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic007G041300--Sobic001G473600 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic007G041300--Sobic005G079800 Sobic007G041300--Sobic003G427100 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic002G259800 Sobic002G259800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic010G279900 Sobic010G279900 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic003G253400--Sobic001G395100 Sobic005G040900 Sobic005G040900 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic009G192500 Sobic009G192500 Sobic003G253400--Sobic009G192500 Sobic003G253400--Sobic004G347100 Sobic007G183300 Sobic007G183300 Sobic003G253400--Sobic007G183300 Sobic003G253400--Sobic008G058800 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100
Octagon: transcription factors


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