Gene annotation
Transcriptome id Sobic.006G051900.1,Sobic.006G051900.2
Synonym Sb06g013860
Functional annotation expressed protein
UniProt C5YES8 , A0A1B6PKB3
Pfam -
Panther DB PTHR36406
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63480 : -
RAP-DB (Rice) LOC_Os04g31910.1 : expressed protein
MaizeGDB (Corn) Zm00025a011766 , Zm00025a055903
Brachypodium -
Barley -
Wheat TraesCS2A02G283900 , TraesCS2B02G300900 , TraesCS2A02G283900
Populus -


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cDNA sequences
Sobic.006G051900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
3 Sobic.006G120800 transglutaminase, putative, expressed -
4 Sobic.010G197800 expressed protein -
5 Sobic.001G472100 frigida, putative, expressed -
6 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -
7 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
8 Sobic.006G049100 expressed protein -
9 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
10 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
12 Sobic.006G276000 CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
13 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7
14 Sobic.003G253400 expressed protein -
15 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
16 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
17 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
18 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
19 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
20 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -


Gene co-expression network
sample Sobic006G051900 Sobic006G051900 Sobic007G050300 Sobic007G050300 Sobic006G051900--Sobic007G050300 Sobic006G278200 Sobic006G278200 Sobic006G051900--Sobic006G278200 Sobic006G120800 Sobic006G120800 Sobic006G051900--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic006G051900--Sobic010G197800 Sobic001G472100 Sobic001G472100 Sobic006G051900--Sobic001G472100 Sobic009G137900 Sobic009G137900 Sobic006G051900--Sobic009G137900 Sobic002G095700 Sobic002G095700 Sobic006G051900--Sobic002G095700 Sobic006G049100 Sobic006G049100 Sobic006G051900--Sobic006G049100 Sobic005G046900 Sobic005G046900 Sobic006G051900--Sobic005G046900 Sobic007G050300--Sobic006G051900 Sobic007G050300--Sobic006G120800 Sobic007G050300--Sobic010G197800 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic010G079800 Sobic010G079800 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic006G278200--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic006G278200--Sobic008G073000 Sobic005G072400 Sobic005G072400 Sobic006G278200--Sobic005G072400 Sobic005G030300 Sobic005G030300 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic002G067800 Sobic002G067800 Sobic006G278200--Sobic002G067800 Sobic006G120800--Sobic001G038100 Sobic006G120800--Sobic007G117100 Sobic009G258400 Sobic009G258400 Sobic006G120800--Sobic009G258400 Sobic001G507400 Sobic001G507400 Sobic006G120800--Sobic001G507400 Sobic006G120800--Sobic007G050300 Sobic006G261100 Sobic006G261100 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic001G335500 Sobic001G335500 Sobic006G120800--Sobic001G335500 Sobic010G197800--Sobic007G050300 Sobic010G197800--Sobic006G051900 Sobic010G197800--Sobic001G335500 Sobic007G210300 Sobic007G210300 Sobic010G197800--Sobic007G210300 Sobic010G197800--Sobic003G253400 Sobic002G224700 Sobic002G224700 Sobic010G197800--Sobic002G224700 Sobic006G276000 Sobic006G276000 Sobic010G197800--Sobic006G276000 Sobic005G032400 Sobic005G032400 Sobic010G197800--Sobic005G032400 Sobic010G197800--Sobic006G120800 Sobic005G040900 Sobic005G040900 Sobic001G472100--Sobic005G040900 Sobic009G059400 Sobic009G059400 Sobic001G472100--Sobic009G059400 Sobic005G198200 Sobic005G198200 Sobic001G472100--Sobic005G198200 Sobic009G125000 Sobic009G125000 Sobic001G472100--Sobic009G125000 Sobic008G058800 Sobic008G058800 Sobic001G472100--Sobic008G058800 Sobic004G345400 Sobic004G345400 Sobic001G472100--Sobic004G345400 Sobic009G129600 Sobic009G129600 Sobic001G472100--Sobic009G129600 Sobic007G139400 Sobic007G139400 Sobic001G472100--Sobic007G139400 Sobic003G354100 Sobic003G354100 Sobic001G472100--Sobic003G354100 Sobic009G017200 Sobic009G017200 Sobic009G137900--Sobic009G017200 Sobic009G137900--Sobic005G198200 Sobic003G051700 Sobic003G051700 Sobic009G137900--Sobic003G051700 Sobic009G137900--Sobic006G278200 Sobic004G180900 Sobic004G180900 Sobic009G137900--Sobic004G180900 Sobic008G111800 Sobic008G111800 Sobic009G137900--Sobic008G111800 Sobic001G426900 Sobic001G426900 Sobic009G137900--Sobic001G426900 Sobic009G137900--Sobic005G072400 Sobic003G343600 Sobic003G343600 Sobic009G137900--Sobic003G343600 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic003G433500 Sobic003G433500 Sobic002G095700--Sobic003G433500 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic010G077500 Sobic010G077500 Sobic006G049100--Sobic010G077500 Sobic001G042200 Sobic001G042200 Sobic006G049100--Sobic001G042200 Sobic001G487100 Sobic001G487100 Sobic006G049100--Sobic001G487100 Sobic007G056500 Sobic007G056500 Sobic006G049100--Sobic007G056500 Sobic001G168900 Sobic001G168900 Sobic006G049100--Sobic001G168900 Sobic006G049100--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic006G049100--Sobic007G187600 Sobic003G132000 Sobic003G132000 Sobic006G049100--Sobic003G132000 Sobic001G395100 Sobic001G395100 Sobic006G049100--Sobic001G395100 Sobic005G046900--Sobic006G276000 Sobic007G041300 Sobic007G041300 Sobic005G046900--Sobic007G041300 Sobic005G079800 Sobic005G079800 Sobic005G046900--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G191700 Sobic005G191700 Sobic005G046900--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic005G046900--Sobic003G409200
Octagon: transcription factors


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