Gene annotation
Transcriptome id Sobic.010G197800.1
Synonym
Functional annotation expressed protein
UniProt A0A194YKD4
Pfam -
Panther DB PTHR31833 PTHR31833:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04614 : -
RAP-DB (Rice) LOC_Os06g42430.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT75611 , PNT75610
Barley HORVU7Hr1G092810.4 , HORVU7Hr1G092810.1 , HORVU7Hr1G092810.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.006G051900 expressed protein -
3 Sobic.001G335500 RNA-binding protein-like, putative, expressed -
4 Sobic.007G210300 G-patch domain containing protein, expressed -
5 Sobic.003G253400 expressed protein -
6 Sobic.002G224700 NFKB, putative, expressed -
7 Sobic.006G276000 CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
8 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
9 Sobic.006G120800 transglutaminase, putative, expressed -
10 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
11 Sobic.004G129600 expressed protein -
12 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
13 Sobic.004G067400 expressed protein -
14 Sobic.002G277300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
15 Sobic.002G408600 expressed protein -
16 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
17 Sobic.003G058900 TATA-binding protein-associated factor 2N, putative, expressed K13098: TLS, RNA-binding protein FUS
18 Sobic.003G004500 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
20 Sobic.004G095300 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3


Gene co-expression network
sample Sobic010G197800 Sobic010G197800 Sobic007G050300 Sobic007G050300 Sobic010G197800--Sobic007G050300 Sobic006G051900 Sobic006G051900 Sobic010G197800--Sobic006G051900 Sobic001G335500 Sobic001G335500 Sobic010G197800--Sobic001G335500 Sobic007G210300 Sobic007G210300 Sobic010G197800--Sobic007G210300 Sobic003G253400 Sobic003G253400 Sobic010G197800--Sobic003G253400 Sobic002G224700 Sobic002G224700 Sobic010G197800--Sobic002G224700 Sobic006G276000 Sobic006G276000 Sobic010G197800--Sobic006G276000 Sobic005G032400 Sobic005G032400 Sobic010G197800--Sobic005G032400 Sobic006G120800 Sobic006G120800 Sobic010G197800--Sobic006G120800 Sobic007G050300--Sobic006G051900 Sobic007G050300--Sobic006G120800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic010G079800 Sobic010G079800 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic006G051900--Sobic007G050300 Sobic006G278200 Sobic006G278200 Sobic006G051900--Sobic006G278200 Sobic006G051900--Sobic006G120800 Sobic006G051900--Sobic010G197800 Sobic001G472100 Sobic001G472100 Sobic006G051900--Sobic001G472100 Sobic009G137900 Sobic009G137900 Sobic006G051900--Sobic009G137900 Sobic006G051900--Sobic002G095700 Sobic006G049100 Sobic006G049100 Sobic006G051900--Sobic006G049100 Sobic005G046900 Sobic005G046900 Sobic006G051900--Sobic005G046900 Sobic004G067400 Sobic004G067400 Sobic001G335500--Sobic004G067400 Sobic001G335500--Sobic006G120800 Sobic001G335500--Sobic003G253400 Sobic007G183300 Sobic007G183300 Sobic001G335500--Sobic007G183300 Sobic009G258400 Sobic009G258400 Sobic001G335500--Sobic009G258400 Sobic004G129600 Sobic004G129600 Sobic001G335500--Sobic004G129600 Sobic002G408600 Sobic002G408600 Sobic001G335500--Sobic002G408600 Sobic010G279900 Sobic010G279900 Sobic001G335500--Sobic010G279900 Sobic005G115500 Sobic005G115500 Sobic001G335500--Sobic005G115500 Sobic007G210300--Sobic010G197800 Sobic005G007700 Sobic005G007700 Sobic007G210300--Sobic005G007700 Sobic007G210300--Sobic002G408600 Sobic004G180900 Sobic004G180900 Sobic007G210300--Sobic004G180900 Sobic006G242401 Sobic006G242401 Sobic007G210300--Sobic006G242401 Sobic007G210300--Sobic007G050300 Sobic007G210300--Sobic006G051900 Sobic001G222900 Sobic001G222900 Sobic007G210300--Sobic001G222900 Sobic001G522400 Sobic001G522400 Sobic007G210300--Sobic001G522400 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic001G395100 Sobic001G395100 Sobic003G253400--Sobic001G395100 Sobic005G040900 Sobic005G040900 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800 Sobic006G248500 Sobic006G248500 Sobic002G224700--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G224700--Sobic008G127400 Sobic007G027700 Sobic007G027700 Sobic002G224700--Sobic007G027700 Sobic001G029400 Sobic001G029400 Sobic002G224700--Sobic001G029400 Sobic004G246700 Sobic004G246700 Sobic002G224700--Sobic004G246700 Sobic007G111100 Sobic007G111100 Sobic002G224700--Sobic007G111100 Sobic002G058300 Sobic002G058300 Sobic002G224700--Sobic002G058300 Sobic001G143500 Sobic001G143500 Sobic002G224700--Sobic001G143500 Sobic006G065800 Sobic006G065800 Sobic002G224700--Sobic006G065800 Sobic006G276000--Sobic005G046900 Sobic002G262700 Sobic002G262700 Sobic006G276000--Sobic002G262700 Sobic002G389800 Sobic002G389800 Sobic006G276000--Sobic002G389800 Sobic007G191700 Sobic007G191700 Sobic006G276000--Sobic007G191700 Sobic006G276000--Sobic006G278200 Sobic007G041300 Sobic007G041300 Sobic006G276000--Sobic007G041300 Sobic006G276000--Sobic006G248500 Sobic006G276000--Sobic003G253400 Sobic006G276000--Sobic002G095700 Sobic003G004500 Sobic003G004500 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic003G415100 Sobic003G415100 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G050600 Sobic005G050600 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic006G120800--Sobic001G038100 Sobic006G120800--Sobic007G117100 Sobic006G120800--Sobic009G258400 Sobic001G507400 Sobic001G507400 Sobic006G120800--Sobic001G507400 Sobic006G120800--Sobic007G050300 Sobic006G261100 Sobic006G261100 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic006G120800--Sobic001G335500
Octagon: transcription factors


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