Gene annotation
Transcriptome id Sobic.007G210300.4,Sobic.007G210300.1,Sobic.007G210300.3
Synonym Sb07g027750
Functional annotation G-patch domain containing protein, expressed
UniProt C5YIS1
Pfam PF12656 PF13821
Panther DB PTHR21032 PTHR21032:SF0
NCBI CDD KOG1994; Predicted RNA binding protein, contains G-patch and Zn-finger domains
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57910 : D111/G-patch domain-containing protein
RAP-DB (Rice) LOC_Os08g39880.1 : G-patch domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005098 , Zm00025a051245
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197800 expressed protein -
2 Sobic.005G007700 expressed protein -
3 Sobic.002G408600 expressed protein -
4 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
5 Sobic.006G242401 - -
6 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.006G051900 expressed protein -
8 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
9 Sobic.001G522400 FHA domain containing protein, putative, expressed -
10 Sobic.002G224700 NFKB, putative, expressed -
11 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
12 Sobic.002G347700 expressed protein -
13 Sobic.001G144600 parafibromin, putative, expressed K15175: parafibromin
14 Sobic.003G058900 TATA-binding protein-associated factor 2N, putative, expressed K13098: TLS, RNA-binding protein FUS
15 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
16 Sobic.001G202266 - -
17 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
18 Sobic.003G045200 expressed protein K18404: tudor domain-containing protein 3
19 Sobic.003G381600 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
20 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor


Gene co-expression network
sample Sobic007G210300 Sobic007G210300 Sobic010G197800 Sobic010G197800 Sobic007G210300--Sobic010G197800 Sobic005G007700 Sobic005G007700 Sobic007G210300--Sobic005G007700 Sobic002G408600 Sobic002G408600 Sobic007G210300--Sobic002G408600 Sobic004G180900 Sobic004G180900 Sobic007G210300--Sobic004G180900 Sobic006G242401 Sobic006G242401 Sobic007G210300--Sobic006G242401 Sobic007G050300 Sobic007G050300 Sobic007G210300--Sobic007G050300 Sobic006G051900 Sobic006G051900 Sobic007G210300--Sobic006G051900 Sobic001G222900 Sobic001G222900 Sobic007G210300--Sobic001G222900 Sobic001G522400 Sobic001G522400 Sobic007G210300--Sobic001G522400 Sobic010G197800--Sobic007G050300 Sobic010G197800--Sobic006G051900 Sobic001G335500 Sobic001G335500 Sobic010G197800--Sobic001G335500 Sobic010G197800--Sobic007G210300 Sobic003G253400 Sobic003G253400 Sobic010G197800--Sobic003G253400 Sobic002G224700 Sobic002G224700 Sobic010G197800--Sobic002G224700 Sobic006G276000 Sobic006G276000 Sobic010G197800--Sobic006G276000 Sobic005G032400 Sobic005G032400 Sobic010G197800--Sobic005G032400 Sobic006G120800 Sobic006G120800 Sobic010G197800--Sobic006G120800 Sobic005G007700--Sobic001G222900 Sobic010G137400 Sobic010G137400 Sobic005G007700--Sobic010G137400 Sobic007G112900 Sobic007G112900 Sobic005G007700--Sobic007G112900 Sobic010G143200 Sobic010G143200 Sobic005G007700--Sobic010G143200 Sobic008G165100 Sobic008G165100 Sobic005G007700--Sobic008G165100 Sobic010G269600 Sobic010G269600 Sobic005G007700--Sobic010G269600 Sobic003G159450 Sobic003G159450 Sobic005G007700--Sobic003G159450 Sobic005G229000 Sobic005G229000 Sobic005G007700--Sobic005G229000 Sobic010G000700 Sobic010G000700 Sobic005G007700--Sobic010G000700 Sobic010G278600 Sobic010G278600 Sobic002G408600--Sobic010G278600 Sobic009G074700 Sobic009G074700 Sobic002G408600--Sobic009G074700 Sobic001G334100 Sobic001G334100 Sobic002G408600--Sobic001G334100 Sobic005G199200 Sobic005G199200 Sobic002G408600--Sobic005G199200 Sobic009G126800 Sobic009G126800 Sobic002G408600--Sobic009G126800 Sobic002G262700 Sobic002G262700 Sobic002G408600--Sobic002G262700 Sobic002G408600--Sobic001G335500 Sobic003G184400 Sobic003G184400 Sobic002G408600--Sobic003G184400 Sobic004G067400 Sobic004G067400 Sobic002G408600--Sobic004G067400 Sobic009G017200 Sobic009G017200 Sobic004G180900--Sobic009G017200 Sobic007G056500 Sobic007G056500 Sobic004G180900--Sobic007G056500 Sobic001G425000 Sobic001G425000 Sobic004G180900--Sobic001G425000 Sobic004G345400 Sobic004G345400 Sobic004G180900--Sobic004G345400 Sobic006G186400 Sobic006G186400 Sobic004G180900--Sobic006G186400 Sobic008G058800 Sobic008G058800 Sobic004G180900--Sobic008G058800 Sobic007G026000 Sobic007G026000 Sobic004G180900--Sobic007G026000 Sobic010G077500 Sobic010G077500 Sobic004G180900--Sobic010G077500 Sobic003G381600 Sobic003G381600 Sobic004G180900--Sobic003G381600 Sobic007G000400 Sobic007G000400 Sobic006G242401--Sobic007G000400 Sobic006G250100 Sobic006G250100 Sobic006G242401--Sobic006G250100 Sobic006G248500 Sobic006G248500 Sobic006G242401--Sobic006G248500 Sobic006G242401--Sobic002G408600 Sobic006G242401--Sobic001G522400 Sobic001G469800 Sobic001G469800 Sobic006G242401--Sobic001G469800 Sobic006G242401--Sobic002G224700 Sobic006G242401--Sobic007G026000 Sobic005G009200 Sobic005G009200 Sobic006G242401--Sobic005G009200 Sobic007G050300--Sobic006G051900 Sobic007G050300--Sobic006G120800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic010G079800 Sobic010G079800 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic006G051900--Sobic007G050300 Sobic006G278200 Sobic006G278200 Sobic006G051900--Sobic006G278200 Sobic006G051900--Sobic006G120800 Sobic006G051900--Sobic010G197800 Sobic001G472100 Sobic001G472100 Sobic006G051900--Sobic001G472100 Sobic009G137900 Sobic009G137900 Sobic006G051900--Sobic009G137900 Sobic006G051900--Sobic002G095700 Sobic006G049100 Sobic006G049100 Sobic006G051900--Sobic006G049100 Sobic005G046900 Sobic005G046900 Sobic006G051900--Sobic005G046900 Sobic001G108900 Sobic001G108900 Sobic001G222900--Sobic001G108900 Sobic003G123000 Sobic003G123000 Sobic001G222900--Sobic003G123000 Sobic001G222900--Sobic005G007700 Sobic004G246700 Sobic004G246700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic002G268900 Sobic002G268900 Sobic001G522400--Sobic002G268900 Sobic004G085300 Sobic004G085300 Sobic001G522400--Sobic004G085300 Sobic001G448100 Sobic001G448100 Sobic001G522400--Sobic001G448100 Sobic009G129600 Sobic009G129600 Sobic001G522400--Sobic009G129600 Sobic009G000400 Sobic009G000400 Sobic001G522400--Sobic009G000400 Sobic002G079100 Sobic002G079100 Sobic001G522400--Sobic002G079100 Sobic006G210200 Sobic006G210200 Sobic001G522400--Sobic006G210200 Sobic001G090300 Sobic001G090300 Sobic001G522400--Sobic001G090300 Sobic001G522400--Sobic007G000400
Octagon: transcription factors


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