Gene annotation
Transcriptome id Sobic.004G067400.1
Synonym Sb04g005650
Functional annotation expressed protein
UniProt A0A194YN37
Pfam -
Panther DB PTHR34356 PTHR34356:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12530 : -
RAP-DB (Rice) LOC_Os03g12720.1 : expressed protein
MaizeGDB (Corn) Zm00025a019283
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G335500 RNA-binding protein-like, putative, expressed -
2 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
3 Sobic.006G120800 transglutaminase, putative, expressed -
4 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
5 Sobic.003G253400 expressed protein -
6 Sobic.002G408600 expressed protein -
7 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
8 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
9 Sobic.010G215900 type II intron maturase protein, putative, expressed -
10 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
11 Sobic.003G246000 exosome complex exonuclease RRP40, putative, expressed K03681: RRP40, exosome complex component RRP40
12 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
13 Sobic.003G062400 PHD finger protein, putative, expressed -
14 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
15 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
16 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
17 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
18 Sobic.005G199200 nuclear pore protein 84/107 containing protein, expressed K14301: NUP107, nuclear pore complex protein Nup107
19 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
20 Sobic.001G023800 expressed protein -


Gene co-expression network
sample Sobic004G067400 Sobic004G067400 Sobic001G335500 Sobic001G335500 Sobic004G067400--Sobic001G335500 Sobic001G334100 Sobic001G334100 Sobic004G067400--Sobic001G334100 Sobic006G120800 Sobic006G120800 Sobic004G067400--Sobic006G120800 Sobic002G142700 Sobic002G142700 Sobic004G067400--Sobic002G142700 Sobic003G253400 Sobic003G253400 Sobic004G067400--Sobic003G253400 Sobic002G408600 Sobic002G408600 Sobic004G067400--Sobic002G408600 Sobic009G258400 Sobic009G258400 Sobic004G067400--Sobic009G258400 Sobic009G036200 Sobic009G036200 Sobic004G067400--Sobic009G036200 Sobic010G215900 Sobic010G215900 Sobic004G067400--Sobic010G215900 Sobic001G335500--Sobic004G067400 Sobic001G335500--Sobic006G120800 Sobic001G335500--Sobic003G253400 Sobic007G183300 Sobic007G183300 Sobic001G335500--Sobic007G183300 Sobic001G335500--Sobic009G258400 Sobic004G129600 Sobic004G129600 Sobic001G335500--Sobic004G129600 Sobic001G335500--Sobic002G408600 Sobic010G279900 Sobic010G279900 Sobic001G335500--Sobic010G279900 Sobic005G115500 Sobic005G115500 Sobic001G335500--Sobic005G115500 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic003G259600 Sobic003G259600 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300 Sobic001G038100 Sobic001G038100 Sobic006G120800--Sobic001G038100 Sobic007G117100 Sobic007G117100 Sobic006G120800--Sobic007G117100 Sobic006G120800--Sobic009G258400 Sobic001G507400 Sobic001G507400 Sobic006G120800--Sobic001G507400 Sobic007G050300 Sobic007G050300 Sobic006G120800--Sobic007G050300 Sobic006G261100 Sobic006G261100 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic006G120800--Sobic001G335500 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G208400 Sobic002G208400 Sobic002G142700--Sobic002G208400 Sobic004G256300 Sobic004G256300 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic003G222700 Sobic003G222700 Sobic002G142700--Sobic003G222700 Sobic001G229300 Sobic001G229300 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic003G360300 Sobic003G360300 Sobic002G142700--Sobic003G360300 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic001G395100 Sobic001G395100 Sobic003G253400--Sobic001G395100 Sobic005G040900 Sobic005G040900 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic009G192500 Sobic009G192500 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800 Sobic010G278600 Sobic010G278600 Sobic002G408600--Sobic010G278600 Sobic009G074700 Sobic009G074700 Sobic002G408600--Sobic009G074700 Sobic002G408600--Sobic001G334100 Sobic002G408600--Sobic005G199200 Sobic009G126800 Sobic009G126800 Sobic002G408600--Sobic009G126800 Sobic002G262700 Sobic002G262700 Sobic002G408600--Sobic002G262700 Sobic002G408600--Sobic001G335500 Sobic002G408600--Sobic003G184400 Sobic002G408600--Sobic004G067400 Sobic001G168900 Sobic001G168900 Sobic009G258400--Sobic001G168900 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic001G114500 Sobic001G114500 Sobic009G258400--Sobic001G114500 Sobic009G258400--Sobic009G036200 Sobic002G077900 Sobic002G077900 Sobic009G258400--Sobic002G077900 Sobic001G291800 Sobic001G291800 Sobic009G258400--Sobic001G291800 Sobic003G132000 Sobic003G132000 Sobic009G258400--Sobic003G132000 Sobic009G258400--Sobic001G507400 Sobic007G111100 Sobic007G111100 Sobic009G036200--Sobic007G111100 Sobic009G036200--Sobic001G395100 Sobic009G036200--Sobic009G258400 Sobic003G212900 Sobic003G212900 Sobic009G036200--Sobic003G212900 Sobic009G036200--Sobic002G262700 Sobic006G121300 Sobic006G121300 Sobic009G036200--Sobic006G121300 Sobic004G346100 Sobic004G346100 Sobic009G036200--Sobic004G346100 Sobic001G042200 Sobic001G042200 Sobic009G036200--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic009G036200--Sobic004G309900 Sobic003G409200 Sobic003G409200 Sobic010G215900--Sobic003G409200 Sobic004G285000 Sobic004G285000 Sobic010G215900--Sobic004G285000 Sobic004G111000 Sobic004G111000 Sobic010G215900--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic010G215900--Sobic001G346900 Sobic001G013300 Sobic001G013300 Sobic010G215900--Sobic001G013300 Sobic006G226300 Sobic006G226300 Sobic010G215900--Sobic006G226300 Sobic008G147200 Sobic008G147200 Sobic010G215900--Sobic008G147200 Sobic003G042400 Sobic003G042400 Sobic010G215900--Sobic003G042400 Sobic004G155600 Sobic004G155600 Sobic010G215900--Sobic004G155600
Octagon: transcription factors


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