Gene annotation
Transcriptome id Sobic.006G120800.3,Sobic.006G120800.4
Synonym Sb06g020140
Functional annotation transglutaminase, putative, expressed
UniProt A0A1Z5RDG6 , A0A1Z5RDI6
Pfam -
Panther DB PTHR33405 PTHR33405:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67170 : -
RAP-DB (Rice) LOC_Os04g40300.1 : transglutaminase, putative, expressed
MaizeGDB (Corn) Zm00025a056306 , Zm00025a010987
Brachypodium KQJ83165
Barley -
Wheat TraesCS6D02G330600 , TraesCS6A02G347500 , TraesCS6B02G381000
Populus -


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cDNA sequences
Sobic.006G120800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
3 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
4 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
5 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
7 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7
8 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
9 Sobic.001G335500 RNA-binding protein-like, putative, expressed -
10 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
11 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
12 Sobic.003G253400 expressed protein -
13 Sobic.006G051900 expressed protein -
14 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
15 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
16 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
17 Sobic.004G067400 expressed protein -
18 Sobic.001G230500 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
19 Sobic.007G041300 expressed protein -
20 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1


Gene co-expression network
sample Sobic006G120800 Sobic006G120800 Sobic001G038100 Sobic001G038100 Sobic006G120800--Sobic001G038100 Sobic007G117100 Sobic007G117100 Sobic006G120800--Sobic007G117100 Sobic009G258400 Sobic009G258400 Sobic006G120800--Sobic009G258400 Sobic001G507400 Sobic001G507400 Sobic006G120800--Sobic001G507400 Sobic007G050300 Sobic007G050300 Sobic006G120800--Sobic007G050300 Sobic006G261100 Sobic006G261100 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic001G335500 Sobic001G335500 Sobic006G120800--Sobic001G335500 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G309100 Sobic001G309100 Sobic001G038100--Sobic001G309100 Sobic001G038100--Sobic001G507400 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic003G354100 Sobic003G354100 Sobic007G117100--Sobic003G354100 Sobic002G014700 Sobic002G014700 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic001G168900 Sobic001G168900 Sobic009G258400--Sobic001G168900 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic001G114500 Sobic001G114500 Sobic009G258400--Sobic001G114500 Sobic009G036200 Sobic009G036200 Sobic009G258400--Sobic009G036200 Sobic002G077900 Sobic002G077900 Sobic009G258400--Sobic002G077900 Sobic001G291800 Sobic001G291800 Sobic009G258400--Sobic001G291800 Sobic003G132000 Sobic003G132000 Sobic009G258400--Sobic003G132000 Sobic009G258400--Sobic001G507400 Sobic001G507400--Sobic001G038100 Sobic001G507400--Sobic007G117100 Sobic007G191700 Sobic007G191700 Sobic001G507400--Sobic007G191700 Sobic001G507400--Sobic006G120800 Sobic001G507400--Sobic009G258400 Sobic001G507400--Sobic002G014700 Sobic001G507400--Sobic003G420700 Sobic001G507400--Sobic002G204000 Sobic001G507400--Sobic010G154000 Sobic006G051900 Sobic006G051900 Sobic007G050300--Sobic006G051900 Sobic007G050300--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic010G079800 Sobic010G079800 Sobic007G050300--Sobic010G079800 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G050300--Sobic007G117100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic006G261100--Sobic003G354100 Sobic004G320100 Sobic004G320100 Sobic010G154000--Sobic004G320100 Sobic010G154000--Sobic006G120800 Sobic010G154000--Sobic001G507400 Sobic006G049100 Sobic006G049100 Sobic010G154000--Sobic006G049100 Sobic001G487100 Sobic001G487100 Sobic010G154000--Sobic001G487100 Sobic006G245700 Sobic006G245700 Sobic010G154000--Sobic006G245700 Sobic003G221500 Sobic003G221500 Sobic010G154000--Sobic003G221500 Sobic010G154000--Sobic009G258400 Sobic004G212700 Sobic004G212700 Sobic010G154000--Sobic004G212700 Sobic002G359900 Sobic002G359900 Sobic010G253100--Sobic002G359900 Sobic010G253100--Sobic001G038100 Sobic010G253100--Sobic006G120800 Sobic010G253100--Sobic006G261100 Sobic001G458200 Sobic001G458200 Sobic010G253100--Sobic001G458200 Sobic010G253100--Sobic002G204000 Sobic010G253100--Sobic002G276900 Sobic002G403200 Sobic002G403200 Sobic010G253100--Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic010G253100--Sobic003G192000 Sobic004G067400 Sobic004G067400 Sobic001G335500--Sobic004G067400 Sobic001G335500--Sobic006G120800 Sobic001G335500--Sobic003G253400 Sobic007G183300 Sobic007G183300 Sobic001G335500--Sobic007G183300 Sobic001G335500--Sobic009G258400 Sobic004G129600 Sobic004G129600 Sobic001G335500--Sobic004G129600 Sobic002G408600 Sobic002G408600 Sobic001G335500--Sobic002G408600 Sobic010G279900 Sobic010G279900 Sobic001G335500--Sobic010G279900 Sobic005G115500 Sobic005G115500 Sobic001G335500--Sobic005G115500
Octagon: transcription factors


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