Gene annotation
Transcriptome id Sobic.007G041300.1
Synonym Sb07g003440
Functional annotation expressed protein
UniProt C5YGV4
Pfam PF10167
Panther DB PTHR21146 PTHR21146:SF0
NCBI CDD KOG4523; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39170 : -
RAP-DB (Rice) LOC_Os08g05630.1 : expressed protein
MaizeGDB (Corn) Zm00025a055206
Brachypodium KQJ95418
Barley HORVU7Hr1G072090.1 , HORVU7Hr1G072120.2 , HORVU7Hr1G072120.1
Wheat TraesCS7D02G299100 , TraesCS7B02G204000 , TraesCS2A02G242900
Populus -


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cDNA sequences
Sobic.007G041300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G102700 - -
2 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
3 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
4 Sobic.004G036300 marker Xucw84, putative, expressed -
5 Sobic.009G137700 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
6 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
7 Sobic.004G088200 transcription factor S-II, central domain containing protein, expressed -
8 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
9 Sobic.003G427100 WD domain, G-beta repeat domain containing protein, expressed K15542: polyadenylation factor subunit 2
10 Sobic.001G039600 U-box domain-containing protein, putative, expressed -
11 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
12 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
13 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
14 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
15 Sobic.010G186600 expressed protein -
16 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
17 Sobic.006G276000 CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
18 Sobic.004G186000 salt tolerant protein, putative, expressed -
19 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
20 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1


Gene co-expression network
sample Sobic007G041300 Sobic007G041300 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic001G473600 Sobic001G473600 Sobic007G041300--Sobic001G473600 Sobic007G191700 Sobic007G191700 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic007G041300--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic007G041300--Sobic003G427100 Sobic007G102700--Sobic007G041300 Sobic004G156800 Sobic004G156800 Sobic007G102700--Sobic004G156800 Sobic010G237900 Sobic010G237900 Sobic007G102700--Sobic010G237900 Sobic004G129300 Sobic004G129300 Sobic007G102700--Sobic004G129300 Sobic007G102700--Sobic007G191700 Sobic001G244300 Sobic001G244300 Sobic007G102700--Sobic001G244300 Sobic007G102700--Sobic001G473600 Sobic010G186600 Sobic010G186600 Sobic007G102700--Sobic010G186600 Sobic001G114500 Sobic001G114500 Sobic007G102700--Sobic001G114500 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic007G191700--Sobic004G129300 Sobic007G191700--Sobic001G395100 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G191700--Sobic007G041300 Sobic007G191700--Sobic001G473600 Sobic004G036300--Sobic007G041300 Sobic002G159200 Sobic002G159200 Sobic004G036300--Sobic002G159200 Sobic004G346100 Sobic004G346100 Sobic004G036300--Sobic004G346100 Sobic009G036200 Sobic009G036200 Sobic004G036300--Sobic009G036200 Sobic003G442000 Sobic003G442000 Sobic004G036300--Sobic003G442000 Sobic004G036300--Sobic009G137700 Sobic004G036300--Sobic004G088200 Sobic003G114500 Sobic003G114500 Sobic004G036300--Sobic003G114500 Sobic004G036300--Sobic007G046200 Sobic009G137700--Sobic007G041300 Sobic010G095700 Sobic010G095700 Sobic009G137700--Sobic010G095700 Sobic007G111100 Sobic007G111100 Sobic009G137700--Sobic007G111100 Sobic009G258400 Sobic009G258400 Sobic009G137700--Sobic009G258400 Sobic002G262700 Sobic002G262700 Sobic009G137700--Sobic002G262700 Sobic009G137700--Sobic004G036300 Sobic009G137700--Sobic007G102700 Sobic009G137700--Sobic009G036200 Sobic004G068500 Sobic004G068500 Sobic009G137700--Sobic004G068500 Sobic003G438900--Sobic005G079800 Sobic002G153700 Sobic002G153700 Sobic003G438900--Sobic002G153700 Sobic003G438900--Sobic003G427100 Sobic003G438900--Sobic007G191700 Sobic007G054400 Sobic007G054400 Sobic003G438900--Sobic007G054400 Sobic001G433300 Sobic001G433300 Sobic003G438900--Sobic001G433300 Sobic003G438900--Sobic007G041300 Sobic003G438900--Sobic004G088200 Sobic001G253200 Sobic001G253200 Sobic003G438900--Sobic001G253200 Sobic003G394300 Sobic003G394300 Sobic004G088200--Sobic003G394300 Sobic010G167900 Sobic010G167900 Sobic004G088200--Sobic010G167900 Sobic005G207500 Sobic005G207500 Sobic004G088200--Sobic005G207500 Sobic006G096900 Sobic006G096900 Sobic004G088200--Sobic006G096900 Sobic004G088200--Sobic002G153700 Sobic007G212300 Sobic007G212300 Sobic004G088200--Sobic007G212300 Sobic001G311500 Sobic001G311500 Sobic004G088200--Sobic001G311500 Sobic003G307000 Sobic003G307000 Sobic004G088200--Sobic003G307000 Sobic005G008800 Sobic005G008800 Sobic004G088200--Sobic005G008800 Sobic005G079800--Sobic003G438900 Sobic005G079800--Sobic001G253200 Sobic005G079800--Sobic007G191700 Sobic005G079800--Sobic002G153700 Sobic005G021500 Sobic005G021500 Sobic005G079800--Sobic005G021500 Sobic005G079800--Sobic003G427100 Sobic005G079800--Sobic007G054400 Sobic010G194700 Sobic010G194700 Sobic005G079800--Sobic010G194700 Sobic004G096500 Sobic004G096500 Sobic005G079800--Sobic004G096500 Sobic003G427100--Sobic005G079800 Sobic007G044100 Sobic007G044100 Sobic003G427100--Sobic007G044100 Sobic003G409200 Sobic003G409200 Sobic003G427100--Sobic003G409200 Sobic004G285000 Sobic004G285000 Sobic003G427100--Sobic004G285000 Sobic001G398800 Sobic001G398800 Sobic003G427100--Sobic001G398800 Sobic003G427100--Sobic002G153700 Sobic004G156500 Sobic004G156500 Sobic003G427100--Sobic004G156500 Sobic003G427100--Sobic003G438900 Sobic003G427100--Sobic003G307000
Octagon: transcription factors


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