Gene annotation
Transcriptome id Sobic.007G102700.3,Sobic.007G102700.5,Sobic.007G102700.6,Sobic.007G102700.8,Sobic.007G102700.7,Sobic.007G102700.2,Sobic.007G102700.4,Sobic.007G102700.1
Synonym
Functional annotation -
UniProt A0A1B6PGZ3 , A0A1Z5R948 , A0A1B6PGX2 , A0A1B6PH42 , A0A1Z5R982 , A0A1Z5RA07 , A0A1Z5RA64 , A0A1B6PGZ0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a027410
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G041300 expressed protein -
2 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
3 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
4 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
5 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
6 Sobic.001G244300 GA19388-PA, putative, expressed K10768: alkylated DNA repair protein alkB homolog 6
7 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
8 Sobic.010G186600 expressed protein -
9 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
10 Sobic.008G147200 tubulin, putative, expressed -
11 Sobic.007G084100 expressed protein -
12 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
13 Sobic.001G039600 U-box domain-containing protein, putative, expressed -
14 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
15 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
16 Sobic.003G266001 - -
17 Sobic.007G183300 expressed protein -
18 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
19 Sobic.004G088200 transcription factor S-II, central domain containing protein, expressed -
20 Sobic.002G145800 flowering time control protein FCA, putative, expressed -


Gene co-expression network
sample Sobic007G102700 Sobic007G102700 Sobic007G041300 Sobic007G041300 Sobic007G102700--Sobic007G041300 Sobic004G156800 Sobic004G156800 Sobic007G102700--Sobic004G156800 Sobic010G237900 Sobic010G237900 Sobic007G102700--Sobic010G237900 Sobic004G129300 Sobic004G129300 Sobic007G102700--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic007G102700--Sobic007G191700 Sobic001G244300 Sobic001G244300 Sobic007G102700--Sobic001G244300 Sobic001G473600 Sobic001G473600 Sobic007G102700--Sobic001G473600 Sobic010G186600 Sobic010G186600 Sobic007G102700--Sobic010G186600 Sobic001G114500 Sobic001G114500 Sobic007G102700--Sobic001G114500 Sobic007G041300--Sobic007G102700 Sobic007G041300--Sobic001G473600 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic007G041300--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic007G041300--Sobic003G427100 Sobic004G156800--Sobic007G102700 Sobic004G156800--Sobic010G237900 Sobic001G259000 Sobic001G259000 Sobic004G156800--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic004G156800--Sobic001G527300 Sobic004G156800--Sobic004G129300 Sobic004G156800--Sobic001G114500 Sobic009G164000 Sobic009G164000 Sobic004G156800--Sobic009G164000 Sobic010G007100 Sobic010G007100 Sobic004G156800--Sobic010G007100 Sobic006G204800 Sobic006G204800 Sobic004G156800--Sobic006G204800 Sobic010G237900--Sobic004G129300 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800 Sobic004G129300--Sobic010G237900 Sobic004G129300--Sobic007G191700 Sobic004G129300--Sobic001G002600 Sobic007G091600 Sobic007G091600 Sobic004G129300--Sobic007G091600 Sobic007G090430 Sobic007G090430 Sobic004G129300--Sobic007G090430 Sobic008G173100 Sobic008G173100 Sobic004G129300--Sobic008G173100 Sobic001G087600 Sobic001G087600 Sobic004G129300--Sobic001G087600 Sobic007G183300 Sobic007G183300 Sobic004G129300--Sobic007G183300 Sobic001G384300 Sobic001G384300 Sobic004G129300--Sobic001G384300 Sobic007G191700--Sobic010G237900 Sobic007G191700--Sobic007G091600 Sobic007G191700--Sobic004G129300 Sobic001G395100 Sobic001G395100 Sobic007G191700--Sobic001G395100 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G191700--Sobic007G041300 Sobic007G191700--Sobic001G473600 Sobic001G120500 Sobic001G120500 Sobic001G244300--Sobic001G120500 Sobic008G063300 Sobic008G063300 Sobic001G244300--Sobic008G063300 Sobic001G407700 Sobic001G407700 Sobic001G244300--Sobic001G407700 Sobic005G172500 Sobic005G172500 Sobic001G244300--Sobic005G172500 Sobic009G056200 Sobic009G056200 Sobic001G244300--Sobic009G056200 Sobic001G244300--Sobic007G102700 Sobic001G058200 Sobic001G058200 Sobic001G244300--Sobic001G058200 Sobic001G244300--Sobic004G156800 Sobic001G401500 Sobic001G401500 Sobic001G244300--Sobic001G401500 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G255600 Sobic009G255600 Sobic010G186600--Sobic009G255600 Sobic008G147200 Sobic008G147200 Sobic010G186600--Sobic008G147200 Sobic002G145800 Sobic002G145800 Sobic010G186600--Sobic002G145800 Sobic001G291800 Sobic001G291800 Sobic010G186600--Sobic001G291800 Sobic002G005000 Sobic002G005000 Sobic010G186600--Sobic002G005000 Sobic001G023800 Sobic001G023800 Sobic010G186600--Sobic001G023800 Sobic010G266500 Sobic010G266500 Sobic010G186600--Sobic010G266500 Sobic001G052400 Sobic001G052400 Sobic010G186600--Sobic001G052400 Sobic003G409200 Sobic003G409200 Sobic010G186600--Sobic003G409200 Sobic003G132000 Sobic003G132000 Sobic001G114500--Sobic003G132000 Sobic001G114500--Sobic003G121300 Sobic008G103300 Sobic008G103300 Sobic001G114500--Sobic008G103300 Sobic001G114500--Sobic009G164000 Sobic001G114500--Sobic001G473600 Sobic001G114500--Sobic007G084100 Sobic005G160400 Sobic005G160400 Sobic001G114500--Sobic005G160400 Sobic009G258400 Sobic009G258400 Sobic001G114500--Sobic009G258400 Sobic001G114500--Sobic004G156800
Octagon: transcription factors


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