Gene annotation
Transcriptome id Sobic.007G183300.1
Synonym Sb07g025350
Functional annotation expressed protein
UniProt C5YH84
Pfam -
Panther DB PTHR35766 PTHR35766:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53620 : -
RAP-DB (Rice) LOC_Os08g43060.3 : expressed protein
MaizeGDB (Corn) Zm00025a005351 , Zm00025a033624
Brachypodium KQJ99240 , KQJ99239 , KQJ99238 , KQJ99237 , KQJ99236
Barley HORVU7Hr1G056470.7 , HORVU7Hr1G056470.6 , HORVU7Hr1G056470.5 , HORVU7Hr1G056470.4 , HORVU7Hr1G056470.3 , HORVU7Hr1G056470.2 , HORVU7Hr1G056470.1 , HORVU7Hr1G056470.9 , HORVU7Hr1G056470.8 , HORVU7Hr1G056470.17 , HORVU7Hr1G056470.16 , HORVU7Hr1G056470.15 , HORVU7Hr1G056470.14 , HORVU7Hr1G056470.13 , HORVU7Hr1G056470.12 , HORVU7Hr1G056470.11 , HORVU7Hr1G056470.10
Wheat TraesCS1D02G162100 , TraesCS1D02G162100 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7B02G166900 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7A02G268600 , TraesCS7D02G269200 , TraesCS7D02G269200 , TraesCS7D02G269200 , TraesCS7D02G269200 , TraesCS7D02G269200
Populus -


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cDNA sequences
Sobic.007G183300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G200800 homeobox domain containing protein, expressed -
2 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
3 Sobic.003G416700 homeobox domain containing protein, expressed -
4 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
5 Sobic.010G279900 PHD-finger domain containing protein, expressed -
6 Sobic.002G154000 EDM2, putative, expressed -
7 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
8 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
9 Sobic.001G051700 expressed protein -
10 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
11 Sobic.004G155600 dnaJ domain containing protein, expressed -
12 Sobic.002G164200 PFT1, putative, expressed K15168: mediator of RNA polymerase II transcription subunit 25
13 Sobic.004G156500 expressed protein -
14 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
15 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
16 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
17 Sobic.002G029100 GYF domain containing protein, putative, expressed -
18 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
19 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
20 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic007G183300 Sobic007G183300 Sobic005G200800 Sobic005G200800 Sobic007G183300--Sobic005G200800 Sobic002G145800 Sobic002G145800 Sobic007G183300--Sobic002G145800 Sobic003G416700 Sobic003G416700 Sobic007G183300--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic007G183300--Sobic003G214600 Sobic010G279900 Sobic010G279900 Sobic007G183300--Sobic010G279900 Sobic002G154000 Sobic002G154000 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic001G051700 Sobic001G051700 Sobic007G183300--Sobic001G051700 Sobic005G200800--Sobic003G214600 Sobic005G200800--Sobic007G183300 Sobic005G200800--Sobic007G168300 Sobic002G029100 Sobic002G029100 Sobic005G200800--Sobic002G029100 Sobic005G200800--Sobic002G154000 Sobic001G461400 Sobic001G461400 Sobic005G200800--Sobic001G461400 Sobic009G255600 Sobic009G255600 Sobic005G200800--Sobic009G255600 Sobic001G063700 Sobic001G063700 Sobic005G200800--Sobic001G063700 Sobic005G200800--Sobic003G416700 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic003G214600--Sobic005G200800 Sobic003G214600--Sobic002G029100 Sobic006G088200 Sobic006G088200 Sobic003G214600--Sobic006G088200 Sobic003G408600 Sobic003G408600 Sobic003G214600--Sobic003G408600 Sobic003G214600--Sobic009G255600 Sobic005G008800 Sobic005G008800 Sobic003G214600--Sobic005G008800 Sobic003G214600--Sobic007G183300 Sobic007G163100 Sobic007G163100 Sobic003G214600--Sobic007G163100 Sobic003G214600--Sobic003G360400 Sobic004G156500 Sobic004G156500 Sobic010G279900--Sobic004G156500 Sobic010G279900--Sobic007G183300 Sobic004G086200 Sobic004G086200 Sobic010G279900--Sobic004G086200 Sobic001G367100 Sobic001G367100 Sobic010G279900--Sobic001G367100 Sobic007G027700 Sobic007G027700 Sobic010G279900--Sobic007G027700 Sobic003G409200 Sobic003G409200 Sobic010G279900--Sobic003G409200 Sobic003G253400 Sobic003G253400 Sobic010G279900--Sobic003G253400 Sobic010G279900--Sobic003G416700 Sobic008G100100 Sobic008G100100 Sobic010G279900--Sobic008G100100 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic001G111600 Sobic001G111600 Sobic005G220000--Sobic001G111600 Sobic005G220000--Sobic002G145800 Sobic005G220000--Sobic007G183900 Sobic005G128400 Sobic005G128400 Sobic005G220000--Sobic005G128400 Sobic003G293200 Sobic003G293200 Sobic005G220000--Sobic003G293200 Sobic005G220000--Sobic007G183300 Sobic005G220000--Sobic003G062300 Sobic010G085200 Sobic010G085200 Sobic005G220000--Sobic010G085200 Sobic001G026500 Sobic001G026500 Sobic005G220000--Sobic001G026500 Sobic003G042400 Sobic003G042400 Sobic007G168300--Sobic003G042400 Sobic007G168300--Sobic005G200800 Sobic007G168300--Sobic010G001100 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic001G051700--Sobic003G416700 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic001G051700--Sobic007G183300 Sobic001G051700--Sobic010G275500 Sobic001G051700--Sobic003G062300
Octagon: transcription factors


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