Gene annotation
Transcriptome id Sobic.005G200800.1,Sobic.005G200800.2
Synonym Sb05g025680
Functional annotation homeobox domain containing protein, expressed
UniProt A0A1B6PTM6 , A0A1B6PTM8
Pfam -
Panther DB PTHR35743 PTHR35743:SF1
NCBI CDD KOG0484; Transcription factor PHOX2/ARIX, contains HOX domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03090 : sequence-specific DNA binding;sequence-specific DNA binding transcription factors
RAP-DB (Rice) LOC_Os05g09630.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015916 , Zm00025a015919 , Zm00025a029219 , Zm00025a033290
Brachypodium PNT63106 , KQJ87495 , KQJ87496 , KQJ87497 , KQJ87498 , KQJ91213
Barley HORVU2Hr1G000360.1 , HORVU2Hr1G000360.3 , HORVU2Hr1G000360.2 , HORVU2Hr1G000360.5 , HORVU2Hr1G000360.4 , HORVU2Hr1G000360.7 , HORVU2Hr1G000360.6 , HORVU2Hr1G000360.20 , HORVU2Hr1G000360.22 , HORVU2Hr1G000360.15 , HORVU2Hr1G000360.14 , HORVU2Hr1G000360.17 , HORVU2Hr1G000360.16 , HORVU2Hr1G000360.11 , HORVU2Hr1G000360.10 , HORVU2Hr1G000360.13 , HORVU2Hr1G000360.12 , HORVU2Hr1G000360.19 , HORVU2Hr1G000360.18
Wheat TraesCS2B02G021100 , TraesCS2B02G021100 , TraesCS2D02G578100 , TraesCS2D02G578100 , TraesCS2D02G578100 , TraesCS2A02G567600 , TraesCS2A02G567600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
2 Sobic.007G183300 expressed protein -
3 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
4 Sobic.002G029100 GYF domain containing protein, putative, expressed -
5 Sobic.002G154000 EDM2, putative, expressed -
6 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
7 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
8 Sobic.001G063700 expressed protein -
9 Sobic.003G416700 homeobox domain containing protein, expressed -
10 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
11 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
12 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
13 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
14 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
15 Sobic.010G001100 chromo domain containing protein, expressed -
16 Sobic.001G400500 calpain, putative, expressed -
17 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
18 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
19 Sobic.004G156500 expressed protein -
20 Sobic.001G398800 FHA domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G200800 Sobic005G200800 Sobic003G214600 Sobic003G214600 Sobic005G200800--Sobic003G214600 Sobic007G183300 Sobic007G183300 Sobic005G200800--Sobic007G183300 Sobic007G168300 Sobic007G168300 Sobic005G200800--Sobic007G168300 Sobic002G029100 Sobic002G029100 Sobic005G200800--Sobic002G029100 Sobic002G154000 Sobic002G154000 Sobic005G200800--Sobic002G154000 Sobic001G461400 Sobic001G461400 Sobic005G200800--Sobic001G461400 Sobic009G255600 Sobic009G255600 Sobic005G200800--Sobic009G255600 Sobic001G063700 Sobic001G063700 Sobic005G200800--Sobic001G063700 Sobic003G416700 Sobic003G416700 Sobic005G200800--Sobic003G416700 Sobic003G214600--Sobic005G200800 Sobic003G214600--Sobic002G029100 Sobic006G088200 Sobic006G088200 Sobic003G214600--Sobic006G088200 Sobic003G408600 Sobic003G408600 Sobic003G214600--Sobic003G408600 Sobic003G214600--Sobic009G255600 Sobic005G008800 Sobic005G008800 Sobic003G214600--Sobic005G008800 Sobic003G214600--Sobic007G183300 Sobic007G163100 Sobic007G163100 Sobic003G214600--Sobic007G163100 Sobic003G360400 Sobic003G360400 Sobic003G214600--Sobic003G360400 Sobic007G183300--Sobic005G200800 Sobic002G145800 Sobic002G145800 Sobic007G183300--Sobic002G145800 Sobic007G183300--Sobic003G416700 Sobic007G183300--Sobic003G214600 Sobic010G279900 Sobic010G279900 Sobic007G183300--Sobic010G279900 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G183300--Sobic007G168300 Sobic001G051700 Sobic001G051700 Sobic007G183300--Sobic001G051700 Sobic003G042400 Sobic003G042400 Sobic007G168300--Sobic003G042400 Sobic007G168300--Sobic005G200800 Sobic010G001100 Sobic010G001100 Sobic007G168300--Sobic010G001100 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic004G311400 Sobic004G311400 Sobic002G029100--Sobic004G311400 Sobic002G029100--Sobic003G214600 Sobic002G029100--Sobic005G200800 Sobic002G029100--Sobic009G255600 Sobic002G029100--Sobic007G183300 Sobic002G245000 Sobic002G245000 Sobic002G029100--Sobic002G245000 Sobic010G186600 Sobic010G186600 Sobic002G029100--Sobic010G186600 Sobic002G164200 Sobic002G164200 Sobic002G029100--Sobic002G164200 Sobic008G002300 Sobic008G002300 Sobic002G029100--Sobic008G002300 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic001G461400--Sobic001G063700 Sobic001G461400--Sobic003G416700 Sobic002G264200 Sobic002G264200 Sobic001G461400--Sobic002G264200 Sobic001G461400--Sobic002G154000 Sobic001G087600 Sobic001G087600 Sobic001G461400--Sobic001G087600 Sobic001G461400--Sobic005G200800 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic001G461400--Sobic010G112100 Sobic009G255600--Sobic010G186600 Sobic009G255600--Sobic003G416700 Sobic009G255600--Sobic003G214600 Sobic009G255600--Sobic005G200800 Sobic009G119000 Sobic009G119000 Sobic009G255600--Sobic009G119000 Sobic009G255600--Sobic002G029100 Sobic009G255600--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic009G255600--Sobic001G291800 Sobic009G255600--Sobic003G360400 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic001G063700--Sobic010G112100 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic009G256300 Sobic009G256300 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G354600 Sobic001G354600 Sobic001G063700--Sobic001G354600 Sobic003G416700--Sobic002G154000 Sobic003G416700--Sobic002G264200 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G416700--Sobic003G360400 Sobic003G416700--Sobic009G119000 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500
Octagon: transcription factors


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