Gene annotation
Transcriptome id Sobic.007G168300.1,Sobic.007G168300.2
Synonym Sb07g024110, SPY
Functional annotation UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed
UniProt C5YN59 , C5YN68 , A1E9S5
Pfam PF13371 PF13844 PF13414 PF00515
Panther DB PTHR23083 PTHR23083:SF397
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G11540 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os08g44510.1 : UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed
MaizeGDB (Corn) Zm00025a005599
Brachypodium KQJ99375
Barley HORVU6Hr1G019280.9 , HORVU6Hr1G019280.6 , HORVU6Hr1G019280.4 , HORVU6Hr1G019280.8 , HORVU6Hr1G019280.1 , HORVU6Hr1G019280.2 , HORVU6Hr1G019280.3 , HORVU6Hr1G019280.5 , HORVU6Hr1G019280.7
Wheat TraesCS6B02G136300 , TraesCS6A02G107700 , TraesCS6A02G107700 , TraesCS6A02G107700 , TraesCS6D02G095600
Populus PNS98413 , PNS98415 , PNS98414 , PNS98416 , PNT32799 , PNT32798 , PNT32797


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
2 Sobic.005G200800 homeobox domain containing protein, expressed -
3 Sobic.010G001100 chromo domain containing protein, expressed -
4 Sobic.002G154000 EDM2, putative, expressed -
5 Sobic.009G126300 RING E3 ligase protein, putative, expressed K16279: E3 ubiquitin-protein ligase KEG
6 Sobic.007G183300 expressed protein -
7 Sobic.001G453000 no apical meristem protein, putative, expressed -
8 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
9 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
10 Sobic.002G362800 formin-like protein 20, putative, expressed K02184: formin 2
11 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
12 Sobic.010G114900 expressed protein -
13 Sobic.003G293200 plus-3 domain containing protein, expressed -
14 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
15 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
16 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
17 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
18 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
19 Sobic.003G416700 homeobox domain containing protein, expressed -
20 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -


Gene co-expression network
sample Sobic007G168300 Sobic007G168300 Sobic003G042400 Sobic003G042400 Sobic007G168300--Sobic003G042400 Sobic005G200800 Sobic005G200800 Sobic007G168300--Sobic005G200800 Sobic010G001100 Sobic010G001100 Sobic007G168300--Sobic010G001100 Sobic002G154000 Sobic002G154000 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G183300 Sobic007G183300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic003G042400--Sobic007G168300 Sobic003G042400--Sobic001G376900 Sobic001G346900 Sobic001G346900 Sobic003G042400--Sobic001G346900 Sobic009G158100 Sobic009G158100 Sobic003G042400--Sobic009G158100 Sobic001G145400 Sobic001G145400 Sobic003G042400--Sobic001G145400 Sobic001G052400 Sobic001G052400 Sobic003G042400--Sobic001G052400 Sobic008G147200 Sobic008G147200 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic007G126500 Sobic007G126500 Sobic003G042400--Sobic007G126500 Sobic003G214600 Sobic003G214600 Sobic005G200800--Sobic003G214600 Sobic005G200800--Sobic007G183300 Sobic005G200800--Sobic007G168300 Sobic002G029100 Sobic002G029100 Sobic005G200800--Sobic002G029100 Sobic005G200800--Sobic002G154000 Sobic001G461400 Sobic001G461400 Sobic005G200800--Sobic001G461400 Sobic005G200800--Sobic009G255600 Sobic001G063700 Sobic001G063700 Sobic005G200800--Sobic001G063700 Sobic003G416700 Sobic003G416700 Sobic005G200800--Sobic003G416700 Sobic010G065300 Sobic010G065300 Sobic010G001100--Sobic010G065300 Sobic004G048800 Sobic004G048800 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic003G293200 Sobic003G293200 Sobic010G001100--Sobic003G293200 Sobic004G242400 Sobic004G242400 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic003G360400 Sobic003G360400 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic009G182600 Sobic009G182600 Sobic009G126300--Sobic009G182600 Sobic001G493700 Sobic001G493700 Sobic009G126300--Sobic001G493700 Sobic009G126300--Sobic007G168300 Sobic001G137000 Sobic001G137000 Sobic009G126300--Sobic001G137000 Sobic002G179400 Sobic002G179400 Sobic009G126300--Sobic002G179400 Sobic004G088501 Sobic004G088501 Sobic009G126300--Sobic004G088501 Sobic009G126300--Sobic009G255600 Sobic001G117200 Sobic001G117200 Sobic009G126300--Sobic001G117200 Sobic002G388500 Sobic002G388500 Sobic009G126300--Sobic002G388500 Sobic007G183300--Sobic005G200800 Sobic002G145800 Sobic002G145800 Sobic007G183300--Sobic002G145800 Sobic007G183300--Sobic003G416700 Sobic007G183300--Sobic003G214600 Sobic010G279900 Sobic010G279900 Sobic007G183300--Sobic010G279900 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G183300--Sobic007G168300 Sobic001G051700 Sobic001G051700 Sobic007G183300--Sobic001G051700 Sobic001G453000--Sobic007G168300 Sobic003G294600 Sobic003G294600 Sobic001G453000--Sobic003G294600 Sobic009G142000 Sobic009G142000 Sobic001G453000--Sobic009G142000 Sobic001G453000--Sobic003G042400 Sobic007G155500 Sobic007G155500 Sobic001G453000--Sobic007G155500 Sobic001G453000--Sobic002G396500 Sobic004G085000 Sobic004G085000 Sobic001G453000--Sobic004G085000 Sobic001G453000--Sobic002G179400 Sobic010G114900 Sobic010G114900 Sobic001G453000--Sobic010G114900 Sobic001G376900--Sobic003G042400 Sobic001G453400 Sobic001G453400 Sobic001G376900--Sobic001G453400 Sobic001G376900--Sobic007G126500 Sobic006G086600 Sobic006G086600 Sobic001G376900--Sobic006G086600 Sobic001G376900--Sobic009G158100 Sobic001G376900--Sobic007G168300 Sobic004G224600 Sobic004G224600 Sobic001G376900--Sobic004G224600 Sobic001G376900--Sobic001G052400 Sobic001G393900 Sobic001G393900 Sobic001G376900--Sobic001G393900 Sobic004G355800 Sobic004G355800 Sobic005G200900--Sobic004G355800 Sobic005G200900--Sobic002G154000 Sobic005G200900--Sobic003G360400 Sobic009G251500 Sobic009G251500 Sobic005G200900--Sobic009G251500 Sobic009G088000 Sobic009G088000 Sobic005G200900--Sobic009G088000 Sobic006G118700 Sobic006G118700 Sobic005G200900--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic005G200900--Sobic006G210000 Sobic004G156500 Sobic004G156500 Sobic005G200900--Sobic004G156500 Sobic008G002500 Sobic008G002500 Sobic005G200900--Sobic008G002500
Octagon: transcription factors


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