Gene annotation
Transcriptome id Sobic.001G453000.3,Sobic.001G453000.2
Synonym Sb01g042570
Functional annotation no apical meristem protein, putative, expressed
UniProt A0A1Z5SAN1 , A0A1Z5SAN3
Pfam PF02365
Panther DB PTHR31079 PTHR31079:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G16610 : -
RAP-DB (Rice) LOC_Os03g12120.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a053039
Brachypodium KQK22841 , KQK22840
Barley HORVU4Hr1G067270.10 , HORVU4Hr1G067270.11 , HORVU4Hr1G067270.16 , HORVU4Hr1G067270.13 , HORVU4Hr1G067270.14 , HORVU4Hr1G067270.15 , HORVU4Hr1G067270.12 , HORVU4Hr1G067270.8 , HORVU4Hr1G067270.9 , HORVU4Hr1G067270.2 , HORVU4Hr1G067270.3 , HORVU4Hr1G067270.1 , HORVU4Hr1G067270.6 , HORVU4Hr1G067270.7 , HORVU4Hr1G067270.4 , HORVU4Hr1G067270.5
Wheat TraesCS4A02G065000 , TraesCS4A02G065000 , TraesCS4A02G065000 , TraesCS4A02G065000 , TraesCS4A02G065000 , TraesCS4D02G242000 , TraesCS4D02G242000 , TraesCS4D02G242000 , TraesCS4B02G242600 , TraesCS4B02G242600 , TraesCS4B02G242600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
2 Sobic.003G294600 Homeobox domain containing protein, expressed -
3 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
4 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
5 Sobic.007G155500 pentatricopeptide containing protein, putative, expressed -
6 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein
7 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
8 Sobic.002G179400 DNA binding protein, putative, expressed -
9 Sobic.010G114900 expressed protein -
10 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
11 Sobic.010G262100 expressed protein -
12 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
13 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
14 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
15 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
16 Sobic.010G001100 chromo domain containing protein, expressed -
17 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
18 Sobic.001G004400 - K14290: XPO1, exportin-1
19 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
20 Sobic.007G077900 zinc finger domain, LSD1 subclass family protein, expressed -


Gene co-expression network
sample Sobic001G453000 Sobic001G453000 Sobic007G168300 Sobic007G168300 Sobic001G453000--Sobic007G168300 Sobic003G294600 Sobic003G294600 Sobic001G453000--Sobic003G294600 Sobic009G142000 Sobic009G142000 Sobic001G453000--Sobic009G142000 Sobic003G042400 Sobic003G042400 Sobic001G453000--Sobic003G042400 Sobic007G155500 Sobic007G155500 Sobic001G453000--Sobic007G155500 Sobic002G396500 Sobic002G396500 Sobic001G453000--Sobic002G396500 Sobic004G085000 Sobic004G085000 Sobic001G453000--Sobic004G085000 Sobic002G179400 Sobic002G179400 Sobic001G453000--Sobic002G179400 Sobic010G114900 Sobic010G114900 Sobic001G453000--Sobic010G114900 Sobic007G168300--Sobic003G042400 Sobic005G200800 Sobic005G200800 Sobic007G168300--Sobic005G200800 Sobic010G001100 Sobic010G001100 Sobic007G168300--Sobic010G001100 Sobic002G154000 Sobic002G154000 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G183300 Sobic007G183300 Sobic007G168300--Sobic007G183300 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic008G002500 Sobic008G002500 Sobic003G294600--Sobic008G002500 Sobic003G294600--Sobic009G142000 Sobic009G088000 Sobic009G088000 Sobic003G294600--Sobic009G088000 Sobic003G294600--Sobic001G453000 Sobic010G148932 Sobic010G148932 Sobic003G294600--Sobic010G148932 Sobic007G077900 Sobic007G077900 Sobic003G294600--Sobic007G077900 Sobic006G040800 Sobic006G040800 Sobic003G294600--Sobic006G040800 Sobic003G445500 Sobic003G445500 Sobic003G294600--Sobic003G445500 Sobic010G053600 Sobic010G053600 Sobic003G294600--Sobic010G053600 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic009G142000--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic009G142000--Sobic007G029200 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic003G042400--Sobic007G168300 Sobic003G042400--Sobic001G376900 Sobic001G346900 Sobic001G346900 Sobic003G042400--Sobic001G346900 Sobic009G158100 Sobic009G158100 Sobic003G042400--Sobic009G158100 Sobic001G145400 Sobic001G145400 Sobic003G042400--Sobic001G145400 Sobic001G052400 Sobic001G052400 Sobic003G042400--Sobic001G052400 Sobic008G147200 Sobic008G147200 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic007G126500 Sobic007G126500 Sobic003G042400--Sobic007G126500 Sobic003G143800 Sobic003G143800 Sobic007G155500--Sobic003G143800 Sobic007G155500--Sobic010G114900 Sobic007G155500--Sobic001G453000 Sobic006G125500 Sobic006G125500 Sobic007G155500--Sobic006G125500 Sobic006G166200 Sobic006G166200 Sobic007G155500--Sobic006G166200 Sobic008G054600 Sobic008G054600 Sobic007G155500--Sobic008G054600 Sobic007G155500--Sobic002G179400 Sobic005G026400 Sobic005G026400 Sobic007G155500--Sobic005G026400 Sobic008G124800 Sobic008G124800 Sobic007G155500--Sobic008G124800 Sobic007G098500 Sobic007G098500 Sobic002G396500--Sobic007G098500 Sobic002G396500--Sobic010G001100 Sobic010G105200 Sobic010G105200 Sobic002G396500--Sobic010G105200 Sobic003G072200 Sobic003G072200 Sobic002G396500--Sobic003G072200 Sobic008G092600 Sobic008G092600 Sobic002G396500--Sobic008G092600 Sobic001G137000 Sobic001G137000 Sobic002G396500--Sobic001G137000 Sobic003G233400 Sobic003G233400 Sobic002G396500--Sobic003G233400 Sobic003G312100 Sobic003G312100 Sobic002G396500--Sobic003G312100 Sobic009G109200 Sobic009G109200 Sobic002G396500--Sobic009G109200 Sobic004G085000--Sobic001G145400 Sobic004G085000--Sobic010G114900 Sobic006G185200 Sobic006G185200 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic001G219900 Sobic001G219900 Sobic004G085000--Sobic001G219900 Sobic002G430300 Sobic002G430300 Sobic004G085000--Sobic002G430300 Sobic009G101200 Sobic009G101200 Sobic004G085000--Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic004G085000--Sobic006G086600 Sobic001G493700 Sobic001G493700 Sobic002G179400--Sobic001G493700 Sobic002G042600 Sobic002G042600 Sobic002G179400--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G179400--Sobic004G053500 Sobic002G429300 Sobic002G429300 Sobic002G179400--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic002G179400--Sobic006G184900 Sobic002G179400--Sobic003G233400 Sobic002G133300 Sobic002G133300 Sobic002G179400--Sobic002G133300 Sobic001G065100 Sobic001G065100 Sobic002G179400--Sobic001G065100 Sobic004G322400 Sobic004G322400 Sobic002G179400--Sobic004G322400 Sobic010G114900--Sobic007G077900 Sobic010G114900--Sobic004G085000 Sobic001G453400 Sobic001G453400 Sobic010G114900--Sobic001G453400 Sobic010G114900--Sobic003G312100 Sobic010G114900--Sobic007G168300 Sobic010G003400 Sobic010G003400 Sobic010G114900--Sobic010G003400 Sobic010G114900--Sobic007G155500 Sobic010G114900--Sobic005G010900 Sobic010G114900--Sobic001G052400
Octagon: transcription factors


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